Populus nigra (Lombardy poplar): 133696395
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Entry
133696395 CDS
T10372
Name
(RefSeq) SAC3 family protein A-like isoform X1
KO
K23802
SAC3 family protein LENG8/THP3
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133696395
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Gene cluster
GFIT
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NCBI-GeneID:
133696395
NCBI-ProteinID:
XP_061974559
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Position
6:2539670..2550318
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AA seq
1041 aa
AA seq
DB search
MMVMNQGVNAQTIASVDPNSREGRYVVDANQGKKSYIPSVNGSETAPWTTHRVDNHSTEN
GILSNSSYHHDQQTQQPARNAQDSLSTTSLSSSSTQGTTNVVQQDYSSYAAYNPTDPYGY
GSTGYSTSYYNNGYQQQTNHSYSQQQPNHSYSQQQPSHSYSQQQQPSHSYSQQQQPSHSY
SSTVGAYQNTGAPYQPLSSFQNTGSYTGTTSYSTTYYNPGDYQTAGGYPSSGYNNQTTLW
NDPNYANYTSQQYSTYAPDTTSAYSSGTAASTSMNNEQHYKQWADYYSQTEVICAPGTEH
LSAASTSNQGSAVSGVYPTSSTQPPSSFTPTSQRTESASSDLPSLQTSATISSAHDGWKQ
GAPSFQIHHASPTQPHFQYSLDSKASYDNFQEQQQTAHQGPNSQFPAAHQVTQSYQSPLP
NAPSLDTRRVNMMQIPTNPRIASNLALGLSKTDKDGSVTNAAAKPAYISVSMPKPNNKVL
SNDTTISMLKPGMFPKSLCHYVERAFDLCKDDTQRIACQAIMKEIITKATANGTLNTLDW
DAEPLFAIPNSEAVNVESSQYSTPVSSVPKYKRSPSRRSKSRWEPLPEEKSVDKSVSTSN
DIVKYGGWDRKAPSANSESKENAVNNVKFSLSEQKRPSKNNQRPVKRQHLADGLDAAYND
ASSDSDKEQGLTAYYSSAISIANTPEEKKRRESRSKRFEKGQGYQTEVNYFKPKNTGAGN
LYSRRASASMLSKSFDDSGSKAVEDIDWDALTVKGTCQEIEKRYLRLTSAPDPSTVRPEE
VLEKALLMVQNSQKNYLYKCDQLKSIRQDLTVQRIQNQLTVKVYETHARLALEAGDLPEY
NQCQSQLKTLYAEGIEGRHMEFAAYNLLCVILHSNNNRDLVSSMSRLTEGTKKDKAVKHA
LAVRAAVTSGNYVMFFRLYKEAPNLNTCLMDLYVEKMRYKAVSCMSWSYRPTIPVSYIAQ
VLGFSSASDGNDEKDSDGSGLEECVEWMKAHGACLTTDNNGEMQLDTKASSSSLYMPEPE
DAVAHGDANLAVNDFLTRTSL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgatgaatcaaggagtcaatgcgcaaaccatagcttcggtggaccctaattca
cgcgagggtcgatatgttgttgatgcgaaccaagggaagaaatcttatattccctcagtt
aatggatctgaaactgcaccatggaccacgcatagagtggataatcactccacagagaat
ggaatcctttcaaattccagttatcaccatgatcagcaaacacagcagcctgcaagaaat
gctcaagatagtttgagcacgacatccctttctagttcatcgactcaaggaacaactaat
gtagtgcaacaagattacagtagttatgcagcatacaaccctacagatccatatggttat
ggaagcactggatattcaacaagttactataataatggttatcagcagcaaaccaaccat
tcatactctcagcaacaaccaaaccattcatactctcagcagcaacctagccattcatac
tctcagcagcagcaacctagccattcatactctcagcagcaacaacctagccattcttac
tcgtcgactgtaggagcatatcaaaacacaggtgctccttatcagcctctttcctcattt
cagaatacagggtcatatactgggacaacaagttattcaaccacttactacaatcctggt
gattatcagacagctggaggttacccaagcagtggatacaataatcagactaccttgtgg
aacgatcccaattatgcaaattatacatctcaacagtattcaacctatgctccagataca
acaagtgcttatagttccggtactgcagcttcaacatcaatgaacaacgagcagcactac
aagcaatgggctgattattacagtcaaacagaagttatttgtgctcccgggacagaacac
ctgtctgctgctagcacatctaaccagggaagtgccgtgtctggtgtgtatcctacttcc
agcacccagcctccctcatctttcaccccgacatctcagaggactgaatctgcgtcttct
gatttgccttctttgcagaccagtgcaactatcagtagtgctcatgatggctggaaacaa
ggggctccaagttttcaaattcaccatgctagtcctacgcaaccacactttcaatattct
cttgattcaaaagcttcatatgataattttcaggaacaacaacagactgctcatcaaggt
cctaattcacaatttcctgctgctcatcaggtgacccagagttatcaatcacctctgcca
aatgctccatctttagatactcgaagggtaaacatgatgcagattccaacaaatcctaga
attgcttcaaatttagctttgggcttatcaaaaaccgataaggatggctctgtgaccaat
gcagcagcaaaacctgcttatattagtgtgtcgatgccaaagccaaacaacaaagtgttg
tccaatgacacaactatttccatgcttaagcctggaatgttccctaagtcactgtgtcat
tatgttgaaagggctttcgatctctgtaaagatgacacacaaaggatagcttgtcaggct
atcatgaaggagatcatcacgaaggcaactgccaatggtacacttaacactctagactgg
gatgcggagcctctttttgcaataccaaattctgaggctgtcaatgtggagagttcacaa
tattccactcctgtttcttcagtaccgaagtataaaaggagtccaagcagacgatctaaa
agtaggtgggagcctttaccagaagagaaatcagtagacaaatctgtttccaccagtaat
gatattgtaaaatatggtggttgggacagaaaggctcctagtgcgaattctgagagcaag
gagaatgctgtgaataatgtgaagttttctttatcggagcagaaacgtccaagcaaaaat
aatcagaggccagttaagaggcaacatcttgctgatggtttggatgctgcttataacgat
gcatcaagtgacagtgataaggagcaaggtttaactgcttattattctagtgcaatatca
attgccaatacaccagaggaaaaaaagagacgtgagagtcgctctaagagatttgaaaag
ggacaaggatatcaaactgaagttaattatttcaaaccaaaaaatactggtgctgggaac
ttgtacagtcggcgggcgagtgcatcgatgcttagcaaaagctttgatgacagtggaagc
aaagctgttgaagacattgattgggatgcactaactgtcaagggtacctgccaagaaatc
gagaaacgttatctgcgccttacttctgcacctgatccctccactgtgagaccagaagaa
gtgctagaaaaggctctgcttatggttcagaattctcaaaagaactacctttataaatgc
gatcaattaaaatctattcgtcaagatctaactgtacaacgaatacagaatcagctgaca
gttaaggtgtatgaaacgcatgctcgattagcactggaagcaggggacttgcccgagtat
aatcagtgtcaatcccagttgaaaaccctctatgctgaaggaattgaaggacgtcatatg
gagtttgcagcttataacttactgtgtgttatattgcactcgaataacaatagagatctt
gtatcatcgatgtcaagattaaccgagggaacaaagaaggataaagctgttaaacatgct
cttgcagttcgtgcagctgtcacttcaggaaactatgtaatgttcttcagactttataag
gaggcgcctaacttgaacacttgccttatggatctctatgttgaaaagatgcggtacaag
gctgtgagttgcatgtcctggtcatatcgccctacaataccagtttcctacattgcacag
gttctgggcttttctagtgcgagtgatgggaatgatgagaaggactcagatgggtcagga
ttagaggagtgtgtggaatggatgaaggcccacggtgcttgccttaccacagataacaat
ggagagatgcagcttgatacaaaggcttcatcttccagtctatatatgccagaacctgaa
gatgctgtggcccatggagacgctaacctggctgttaatgattttctgacacggacatcc
ttgtag
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