Populus nigra (Lombardy poplar): 133696409
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Entry
133696409 CDS
T10372
Name
(RefSeq) vesicle transport v-SNARE 12-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
133696409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133696409
Membrane trafficking [BR:
pnz04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
133696409
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
PLU-1
RIFIN
YqjK
Exonuc_VII_L
FliJ
PYRIN
ChrB_N
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
133696409
NCBI-ProteinID:
XP_061974580
LinkDB
All DBs
Position
6:complement(5881469..5883529)
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AA seq
223 aa
AA seq
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MSEVFEGYERQYCELSANLSRKCNSTSLLPDGVEKNAKVNEIKSGLDDCDVLIRKMDLEA
RSLQPNVKAMLLAKLREYKSDLNKLKREFKRITSGDVNQASRVELLEAGMADVHSVSADQ
RERMTMSVERLNQSGDRIKESRRTMLETEELGVSILEDLHQQRQTLLHAHNKLHGVDDAI
DKSKKVLTSMLRRMTRNKWIVGSVIAALVVAIIFIILFKISHH
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagtcttcgaaggatacgagcgtcagtactgcgagctctctgccaatctctct
cgaaagtgcaactccacttctcttcttcccgatggagtggaaaagaacgcaaaggtcaat
gagattaaatctggactggatgattgtgatgttctgattcggaaaatggacctcgaggcg
aggagtttgcagccgaatgtgaaggctatgcttctggccaagttgagggaatataagtct
gatctgaataagttgaagagggaatttaagaggataacttctggcgatgtcaatcaggct
tcccgtgtagagttgttggaagctgggatggctgatgtgcattcggtttctgcagatcaa
agagaaagaatgactatgtccgtagagagactaaatcagtcaggtgataggattaaggag
agcagaagaaccatgctagagacagaagagcttggtgtctcaattcttgaagatttgcat
caacagcgccagactctcctacatgctcataacaagctccatggagtagatgatgctatt
gacaagagtaagaaagtcctgacttctatgttgagaagaatgaccagaaacaagtggatc
gttggctcagtaattgctgctcttgtcgtggccatcatctttataatcttattcaagatt
tctcatcattaa
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