KEGG   Populus nigra (Lombardy poplar): 133696449
Entry
133696449         CDS       T10372                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    133696449
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pnz01009]
    133696449
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133696449
Enzymes [BR:pnz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     133696449
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     133696449
Protein phosphatases and associated proteins [BR:pnz01009]
 HAD phosphatases
  Other HAD phosphatases
   133696449
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     133696449
SSDB
Motif
Pfam: PNK3P zf-PARP DUF7422 Zn_ribbon_HMPTM
Other DBs
NCBI-GeneID: 133696449
NCBI-ProteinID: XP_061974622
LinkDB
Position
1:complement(8977629..8982151)
AA seq 377 aa
MLAHYCTALTSNSKNSCLFFFRITKHSSFCSTLQNPKRAMPPTSKARIIAEYAKSSRSLC
KTCSKAISAKALRLGLVSRDSRGFDMTKWHHLGCFSDKIDYTEHIGGFDSLQSCDQEALK
KLAEQVSNGDQDVEISRKSSKLIQRTDEDVEESELEKINTKKTKLSIANEEASLDIAFSL
SDVRDNYKDATLLPKWKAFQTIIFLERDDGLRDSNKIAAFDFDGCLAKTSVKRVGADAWS
IMFPSIPDKLLSLYNDGFKLVIFTNESNIDRWKNKRQVAVDSKIGRLNNFIKHVKVPIQV
FIACGFDGKVEDPFRKPKPGMWQIMEKHFNSGISIDMDQSFYVGDAAGRPNDHSDADIKF
AKVIGLKFHVPEDYFGV
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgctcgcccattactgtacagctctcacctccaacagcaaaaactcttgtcttttcttt
ttcagaattacaaaacactctagtttttgttccactctccaaaaccccaaaagagcaatg
cctcctacttcaaaagccagaatcatcgccgagtacgcgaaatcgagcaggtcattgtgc
aagacatgctcgaaagcaatatctgctaaggccctcaggttgggtttggtcagtagagac
tcacgagggtttgatatgaccaaatggcatcacttgggttgcttctctgacaagattgac
tataccgagcacattggagggtttgattctctccagagttgtgatcaggaagccctgaag
aaattggcggaacaggtttcaaatggagatcaagatgttgaaataagccggaaaagttcc
aagctgattcagagaacagatgaagatgtggaagaaagtgaactggagaaaataaatacg
aagaaaactaagttgtcaatagctaatgaggaagccagcctggacatagccttttcactc
tccgatgttagggacaattataaggacgccacattattacctaaatggaaggcatttcag
acaattatatttcttgaacgggatgatggtctccgtgattcgaataaaattgctgcattt
gattttgatggctgtctcgcaaaaacatctgtcaagagagtaggtgcagatgcttggtcc
atcatgttcccctcaataccagacaagctgctgagcttatataatgatggcttcaagctg
gttatattcacgaatgaatccaatattgatcgctggaagaacaaaaggcaggtagctgtg
gactcaaaaattggacgcctaaacaacttcatcaagcatgtcaaggttccaatccaggtt
tttatagcttgtgggtttgatggtaaagtagaagatcccttccgcaaacccaaacctgga
atgtggcagattatggagaaacactttaactctggcatctccattgatatggatcaatcc
ttttatgttggtgatgcagcagggagacccaatgatcatagcgatgctgacataaaattt
gcaaaggttattggattgaaattccatgtcccagaggactactttggtgtctaa

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