Populus nigra (Lombardy poplar): 133696750
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Entry
133696750 CDS
T10372
Name
(RefSeq) SAC3 family protein B
KO
K23719
nuclear mRNA export protein SAC3
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133696750
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
133696750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
Motif
Other DBs
NCBI-GeneID:
133696750
NCBI-ProteinID:
XP_061975008
LinkDB
All DBs
Position
6:complement(18817738..18827700)
Genome browser
AA seq
1605 aa
AA seq
DB search
MSSGFGKKAGPTPSSLSESPFGPPQPPFPHFPPRGSEAVRSPPITYQDPFLATTPYQSTG
IPRRPEAVERSRSPPSRPTTTPSYPSSEPSFNQFPPSRWVNEQGSLFNDASAVASFVASR
NSGTIVTAKGARFQDLKRARSPPPHSIDEGIARNPTQNFIPSPSDFHAGSGNHSVPPRTR
SPPLAFESNKTAKHASRPFGEGQQPTLPPSAWDDQPKLPGNYPDLLAHQDPSVLSYAGSH
DSIHASKRTRSPPVSPATEVPHNNNLPVQKEYKRTSMSPPRLGSRSNAIFSTSNSQIPQR
NFPSVNATVDAAPTKTTNFAMSKRTRSPPFSLADKVSLENSYSTQDDAEREIQAKAKRLA
RFKAELSDDFENSRDAADQKISASGREQAVVGRQNFYDGHSIESAGDLSNSNISPEFDGS
ETPTIIVGLCPDMCPESERVERERKGDLDHYERLDGERNQTNKFLAVKKYNRMAEREANF
IRPLPILQKTIDYLINLLDQPYNDNFLGMYNFLWDRMRAIRMDLRMQHIFSQESITMLEQ
MIRLHIIAMHELCKYKTGEGSIEGFDAHLNIEQMNKTSVELFQMYDDHRRKGINVPTEKE
FRGYYALLKLDKHPGYKVEPAELSLDLAKMTPEIRQTPEVLFARNVARACRTGNFIAFFR
LARKASYLQACLMHAHFAKLRTQALASLHSGLQNNQGLPVGLIAKWLAMEEVEKLLEYHG
FAIREFEEPYMVKDGLFLNADKDYPIKCSNLVHMKKSKRIVDDVSPPSQRVPLPAEAAKE
IQPLMLYKHEAKAVPSAFVDAKSFASEIDEEIPDFEVVASPSNVAQVEPMIKEPIVNQTS
QDDHQVASAYIFPWGESWAHSSPEALPAYFGAVEKPNHDTLFRVSPKRKMPSSMEEMSLP
IMSRTGLLERSPSDKYGYNRENSTSQIVAINESRDEEPFDINQASENDEVMESNEDEEIA
QAKLKLIIRLWRRRSLKRRELHEQRQMAANAALSSLSLGPPIRQARDQSITATVFDINHV
MKERYEKHEQSWSRLNVSDEIADALFRRNPDAKCLCWKIILCSQINNQGDRLGQRSQVMQ
GAADSWVFSKLMPSVKDNDDGDLLISSPGLAIWRKWLPSQSGNHVNCCLSVVKDFKFDYL
NEKVDGASAVIFLVSESIPWNIQKIQLRKLLAYIPSGSKLPLLVLSGSNYEEDLDLSSII
VNELGLLDIDKSQISSFSIVFLIEDKQVEMWDGFFSDMRLREGLRWLASESPRQPDVHCV
KTRDLVLTHLNPLLDVLENMRDNEVSPNHCISAFNEALDWSLGEIAAAAKSNPTNWPCPE
IALLENCCDELMLMNWYLPSIGWSLAERIEPFLSAIRDCKLPNFPDTIPWLNKGANTFNE
IEDLRSQLENCFVTYLTELSGMMGILLAAKEAYVMLQRNARLELHDSSYYIVPKWIMIFR
RIFNWRLTSLSSGAFLSAFILRCQDVDTASRIPYELQLEGGGSSRYLIEPTLDEVIDAGC
SLFMSGRYQGHAETFQPLPRTISNGDVCKDANTSDLVDNQRTSAQNDYLLGTENIDPVSN
QLNTTGSTEVVFSRKVTEEADKLSKLLEQCNVVQNSIGEKLSFYF
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagggtttggaaagaaagcaggaccaaccccatcttcattatccgaatctcct
tttggtcctcctcagccgccttttccccatttcccccccaggggttcggaagctgtgcgg
tcaccgccgataacttatcaagacccttttcttgctaccactccttaccaatcaaccggg
atccccaggaggccggaagctgttgaaagatcacggtcgcctccatcccgtccgactaca
accccttcttacccatccagtgagccctcgttcaatcagtttcctccttctagatgggtc
aatgagcagggatccttgtttaatgatgcttctgcagtcgcatcatttgttgcttcacgt
aattctggaactattgtaactgctaaaggtgctagatttcaggacctgaagagggccaga
tcacctcctccacattctattgatgaaggcattgcgagaaatcccactcaaaatttcatt
ccaagcccttcagattttcatgctggcagtgggaatcactcagtaccaccaagaacaaga
tcacctcctttggcttttgaaagcaataaaacagctaagcatgctagtcgtccttttggc
gaaggccaacagcctactttgcctccatctgcatgggatgatcagcccaagttgccagga
aattaccctgacttactggctcaccaagacccatcagtgctatcttatgcaggctctcac
gattctatccatgcctcaaagagaactaggtcaccgcctgtttcaccagctactgaagtt
ccacataataacaatcttcctgttcaaaaggaatataaaaggacttctatgtctcctcct
aggttaggtagtaggtcaaatgctattttcagcacctcaaattctcaaattcctcaaagg
aattttccgtctgtaaatgctactgttgatgccgctcccaccaagaccaccaactttgct
atgtcaaaaagaacaagatcaccacctttctcgttagctgataaagtctctctggaaaac
tcatattccacccaagatgatgcggaaagagagatacaagcaaaggcaaagcggttagct
cgattcaaggcagaattaagtgatgattttgaaaatagccgagatgctgctgaccagaag
atttctgcaagtggacgtgagcaggctgttgttggaaggcaaaatttttatgatggtcac
tctattgaatcagcaggggatttaagcaacagcaatatttcaccagagtttgatgggtcc
gaaacacccaccattattgtcgggttatgtccggatatgtgtcctgagtcagaaagggta
gaaagagaaaggaaaggggatcttgaccattatgagcgcttggatggagagagaaatcaa
accaacaaatttcttgctgttaagaaatataatagaatggcagagagggaagcaaacttc
atacgtcccttgccaatcctgcagaagactattgattatttaatcaatttgctcgatcag
ccttacaatgataactttcttggcatgtataacttcttatgggataggatgcgagcaatc
cgaatggacctcaggatgcagcatatttttagccaagagtctataactatgctggagcaa
atgataaggcttcatataattgccatgcatgagttatgcaaatacaaaacaggagagggg
tcaattgagggatttgatgcgcaccttaacattgaacagatgaacaaaacttcagttgaa
ctgtttcaaatgtatgatgaccaccggaggaaagggattaatgtgccaacagaaaaagaa
tttcgtggttattatgcacttctcaaactagataagcatcctggatataaagttgaacct
gcagaactctcactggatcttgcgaagatgacaccagagataaggcaaaccccagaagtg
ctttttgctcgtaatgtagcaagggcttgtagaacaggtaactttattgccttttttcgg
cttgcaaggaaagcaagttaccttcaagcatgcttaatgcacgctcactttgcaaagtta
cgaacccaggcacttgcttctttgcattctggtctacaaaataaccaaggtctccctgtt
ggccttattgccaagtggcttgcaatggaggaagtagaaaaactactggagtatcatggc
tttgccataagggaatttgaagaaccatatatggtgaaggatggcctgtttctcaatgct
gacaaggattaccctatcaagtgctcaaaccttgttcatatgaaaaaatcaaaaaggatt
gttgatgatgtttcaccaccttctcagagggtaccattgcctgctgaagcagctaaagag
atacagcctcttatgctctacaagcatgaagcaaaggctgttccttctgcttttgtggat
gcaaagagttttgccagtgaaattgatgaagaaattcctgactttgaagttgttgcatcc
ccaagtaatgtagcacaggtggagccaatgatcaaagagcctatagttaaccaaacgagt
caagatgatcatcaggtagctagtgcctatatctttccatggggtgaatcctgggctcat
agctcccctgaagctttgccagcttattttggagctgtggagaagccaaaccacgatact
cttttcagagtctctcctaagagaaagatgccttctagcatggaagaaatgtcgttacca
attatgtcaagaacaggtttgctagagagatccccgagtgataaatatggttataaccgg
gagaactcaacttcccagattgtggctattaatgaatcaagagatgaagaaccttttgat
ataaatcaagcaagtgaaaatgatgaggttatggaaagtaatgaagatgaagaaattgct
caggcaaaactcaagttgattataaggttatggaggcggcgatctttaaagcgaagggag
ttgcatgagcaaaggcaaatggcagcaaatgccgcactaagttcgttgtcattgggacca
ccaattcgacaggccagagatcaatctatcactgctaccgtatttgacatcaatcatgtc
atgaaagagaggtacgaaaaacatgaacaatcatggtcaaggctgaatgtttcagatgag
atcgcagatgctcttttcagaagaaacccagatgccaaatgtctctgctggaaaattatt
ttatgttctcagatcaacaaccaaggagacagacttgggcagagaagccaggttatgcaa
ggggcagctgactcatgggtgttttcaaagctcatgccttctgtaaaagataatgatgat
ggtgatctgcttatttcatctcctggcctggcaatatggagaaaatggcttccaagtcaa
tctggtaatcacgtaaactgctgcttgtcagttgttaaggattttaaatttgactatttg
aatgagaaagtagatggagcaagtgcggttatcttccttgtatctgaaagcatcccatgg
aatattcaaaaaatccaacttcgtaaacttctagcatacatcccttccggttccaaattg
ccccttcttgtcttaagtggttcaaattatgaagaggatttggatctttcttctattata
gtcaatgaactgggccttctggacattgacaaatcacagattagtagtttttcaattgtt
ttccttattgaagacaaacaagtggaaatgtgggatggatttttcagtgacatgcgatta
agggaaggactacggtggttggcaagtgaatcaccacgacaacctgatgttcactgtgta
aaaacacgggatttggttctaacccatttaaatcctttgttggatgtccttgaaaacatg
agggataatgaggtaagtccaaaccattgtatctcagccttcaatgaagccttggattgg
tctctgggagaaattgctgctgctgccaaatcaaatcctaccaattggccttgtcctgag
attgccttgctggagaattgctgcgatgagctaatgttgatgaactggtacttgccaagc
ataggttggagcttggcagaaagaattgaaccctttttaagtgcaataagggactgtaaa
cttcctaattttcctgataccataccctggttgaataaaggtgcaaatacgttcaatgag
attgaagacctgagatctcaacttgagaattgctttgtgacatacctgactgaattaagt
gggatgatgggtattcttttagctgcaaaagaggcatatgtaatgctacaaagaaatgct
cgacttgagctccatgactcaagctactatatagttcccaagtggattatgatatttaga
cggatttttaattggcgattaacgagtttatccagtggagctttcttgtcagccttcatt
ttaagatgtcaagatgttgatacagcttcaagaattccctatgagctgcagcttgaggga
gggggatcctcacgttatctaattgaacctacccttgatgaagtaattgatgctggctgc
agcctctttatgtcaggaaggtatcaaggacacgcagaaacttttcagcctctaccaagg
acaatttcaaatggtgatgtttgcaaggacgctaacacgagtgacttggtggataaccaa
agaacttcagcacaaaatgactatttgttggggacagagaacattgatcctgtaagtaat
caattaaacactactggtagtactgaggttgtgttttccaggaaagtaaccgaagaagct
gacaaattaagcaagttgttggagcagtgtaacgtagtgcaaaactcaataggtgagaag
ctttccttttatttctga
DBGET
integrated database retrieval system