Populus nigra (Lombardy poplar): 133696838
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Entry
133696838 CDS
T10372
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00531
Glycosaminoglycan degradation
pnz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
133696838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pnz00536
]
133696838
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
133696838
Glycosaminoglycan binding proteins [BR:
pnz00536
]
Heparan sulfate / Heparin
Enzymes
133696838
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
DP
Motif
Other DBs
NCBI-GeneID:
133696838
NCBI-ProteinID:
XP_061975102
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All DBs
Position
6:complement(6088265..6091785)
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AA seq
520 aa
AA seq
DB search
MAGLRLAVSWILASLCFSSLCAADDVKVFVQGVTSIAKTDDNFICATLDWWPSEKCDYNQ
CPWGKAGLLNLDLNNKILANAIKAFDPLRIRLGGSLQDQLVYQVGDSTKKFPHFKKQDDG
LFGFSKGSLPMDRWDQLNDLFKQTNAKITFGLNALIGKRKSDNSTLWVGEWNSKNARDFM
KYTASKGYKIDSYELGNELCASGVSARLEADQYAKDIIQLKEIVKELYPDRETQPRVLGP
AGFYDTEWFKTFLEVSGPHAVDGVTHHIYNLGAGVDKTLINKIQDPYFLDEIAETFKDLE
NVVKEFGPWAGPWVGESGGAYNSGGKDVSHTFVNGFWYLDQLGMTATFNHKVYCRQTLIG
GNYGLLNTTSFIPNPDYYGALLWHRLMGKTVLATNHFGSPYLRTYTHCSKQKPGITMLII
NMSNSTSIDVSVTNDENKYPHNYRMTVNGSYQREEYHLTPKDGNIQSDVVLLNGTPLQLT
SSQDIPSLSPMIVDSSSPIRVAPDSIVYVTIRDFKAPACA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctaagacttgctgtgtcttggattcttgcatcgctgtgcttctcttcttta
tgtgcagcagatgatgtgaaggtttttgttcaaggggtaacttccatagcgaaaaccgat
gataattttatatgtgcaactttagattggtggcctagtgaaaagtgcgattacaatcag
tgcccatgggggaaggctggcctcctcaatctggatttgaacaacaagattctggctaat
gctatcaaggcatttgatcctctgagaatcagacttggaggctcattgcaagatcagttg
gtttatcaagtcggcgactccactaaaaaattccctcatttcaagaaacaagatgatggt
ttatttggattcagcaaaggttctctgcccatggatagatgggatcagctcaatgacttg
tttaagcaaacaaatgctaaaatcacatttggtttaaatgcccttattgggaagaggaaa
tctgacaattctacactttgggttggtgaatggaactcaaaaaatgcccgagatttcatg
aaatatactgcatcaaagggatacaagattgattcctatgaattaggaaatgagttgtgt
gcatctggggtatctgcaagactggaggctgaccagtatgctaaagatattattcaactt
aaagaaatagtgaaggagctgtacccagatcgcgagacacagcctagggtgttgggccct
gctggtttttacgacactgaatggtttaaaaccttccttgaggtctcaggaccacatgct
gtcgatggagtaacccaccatatatacaatcttggtgcaggtgtcgataaaaccctgatc
aacaagattcaggatccatatttcctggatgaaatagcagaaacattcaaagaccttgaa
aatgttgtcaaggaatttggtccgtgggcaggaccatgggttggggaatctggtggtgct
tataacagtggtggcaaggatgtctcgcatacttttgttaatggattttggtacctggat
caactaggcatgacagcaaccttcaatcataaggtctactgcagacagaccctcattgga
ggaaactatggtctgcttaacactacatccttcatcccaaatccagactattatggtgca
cttctgtggcatcgcttaatgggaaagactgtgctcgctaccaatcattttggctcccca
tatttgagaacatacactcattgttcaaagcagaagcctggcatcacaatgcttatcatt
aacatgtcaaactccacttccattgatgtttctgtcaccaatgacgaaaacaagtaccca
cataattacagaatgactgttaatggttcatatcaaagagaagagtatcatttgacccca
aaagatggcaacatccagagtgatgtggtactgctgaatggaactcctttgcagcttaca
agttctcaagacattccttcactgagtccaatgattgttgattcttcttccccgatcaga
gtcgcccctgattcaatagtttatgttactattagagacttcaaagctcctgcatgtgct
tag
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