Populus nigra (Lombardy poplar): 133697089
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Entry
133697089 CDS
T10372
Name
(RefSeq) alpha-amylase 3, chloroplastic isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00500
Starch and sucrose metabolism
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
133697089
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
133697089
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Gene cluster
GFIT
Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
BLTP3A_B
Motif
Other DBs
NCBI-GeneID:
133697089
NCBI-ProteinID:
XP_061975420
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Position
6:10965603..10980336
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AA seq
918 aa
AA seq
DB search
MSAVSVVKPFLRYSRFEKPGYARSRRKAAITVTTAALIKSSSSFNCCCSLKPRRKLLSNA
SYFPFLDLHRVKTHTARASSTDTAVVESTNDVVFKETFPLSRTETTEGKIFVRLDQSKAK
EKEDQWQQLTVGCSLPGKWILHWGVSYVDDTGSEWDQPPENMRPPGSIPIKDYAVETPLK
KASEGDKFHQVKIGIDPKSPVAALNFVLKDEETGVWYQHKGRDFKVPLVDCLLDSGGGNV
IGGKGGFSMWPGAMLSNMFLKADALASEGKDSSSRSKDPKQETRKVEGFYEELPIAKFAV
IENSVTVSVSKCLKTAKNLLYLVTDLPGEVVVHWGVCRDDAKKWEIPAAPHPPDTTVFKN
KALRTVLQAKEDGNGRSGSFTLDGDLVGFLFVLKLNDNTWLNCMGNDFYIALPISSSIPA
LSVAGQSEVAPVSENTVGADQEVSHAIYTDGIINEIRSLVSDFSSEKRQKTKTKEAQESI
LQEIEKLAAEAYSIFRSSMPTFLDETALESEATEAPKICSGTGTGHEILLQGFNWESHKL
GHWYMELKKKVEEISSLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGNIDELKDLVKR
FHGKGVKVLGDAVLNHRCAHYKNGNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDN
FHAAPNIDHSQEFVRKDLKEWLLWLRKEIGYDGWRLDFVRGFWGGYVKDYLDASEPYFAV
GEYWDSLSYTYGELDHSQDAHRQRIVDWINATSGTAGAFDVTTKGILHTTLERCEYWRLS
DQKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPSGKEMQGYAYILTHPGTPAVFYDH
IFSHYQSEIAALISLRNRNKIHCRSTVKITKAERDVYAAIIDEKVAVKIGPGHYEPPSGP
YSWSSKIEGRNYKVWEAS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagttagcgtagtaaagcctttccttcgatactctcgctttgaaaagcccgga
tatgctcgtagcaggagaaaggctgctataactgtcactactgctgctctcatcaaatct
tcttcgtcttttaattgttgctgttcactaaaaccaagacgaaaactcctgtcaaatgcc
tcctacttcccttttcttgaccttcatagggtcaaaacccacacggctagagctagctcc
accgatacggctgttgttgaatccactaatgatgtcgtattcaaagagaccttccctctt
tcgcgtactgaaacgactgaaggaaagatttttgtaagattagatcagagtaaggccaag
gagaaggaggatcaatggcagcagcttactgtagggtgtagccttccagggaaatggatt
cttcattggggtgtttcttatgtcgatgatactggcagtgaatgggatcaacctccagag
aatatgagaccccctggttcgattcctataaaggactatgccgtagagacgccgttaaag
aaggcatcagaaggagataagtttcaccaagtgaagattgggattgatcccaaaagtccg
gttgcagccctgaattttgttttgaaggatgaagaaactggagtttggtatcagcacaaa
gggagagatttcaaggtgcctcttgtggactgcttgctcgattctggcggtggaaacgtc
ataggaggaaaggggggctttagtatgtggccaggggcaatgctttctaacatgttcctc
aaagcagatgcattggcttctgaaggtaaagatagcagtagcagatccaaagaccctaaa
caagaaactaggaaggtagaaggattctatgaagagctgcctattgctaaatttgccgtg
attgaaaactcggtgactgtttcagttagcaagtgtctcaagacagccaagaatcttctc
tatttagtaactgatctacctggagaggttgttgttcactggggagtttgcagagatgat
gcgaaaaaatgggaaattccagctgctccacatccaccagacacaactgtgtttaagaac
aaggctttgcggactgtgctacaggcaaaagaggatggaaatggacgttcagggtcattt
actttggacggagaccttgtaggcttcctttttgttctcaagctgaatgataacacttgg
ttgaattgtatgggaaatgatttctatatcgctctcccaatctcaagtagcattcctgct
ctatcagtagccggacaatctgaagttgcaccagtatctgaaaacactgtaggagcagat
caagaagtttctcatgctatatatactgatggtataattaatgaaatacggagcttagtt
agtgacttttcctctgagaagagacagaagacaaaaacaaaagaagcacaagaaagcatt
ctccaagaaattgaaaaattggctgctgaagcatacagtatcttcagaagctcaatgcca
acttttctggatgaaactgctctggaatccgaggcaacagaggctcctaaaatatgctca
ggaactggcactggtcatgaaatattgctccaaggttttaattgggaatcccataaattg
ggacattggtacatggagctaaaaaaaaaagttgaagaaatatcatcccttggattcact
gtggtttggttgcccccaccaacagaatctgtgtcacctgaaggttacatgccaaaagat
ttgtataatcttaactccagatatggaaatattgatgagctgaaggatcttgtgaagaga
ttccatggaaagggtgttaaagttcttggagatgctgttttgaaccatcgttgtgcacac
tacaagaatgggaatggtgtatggaatatttttggaggccgcttgaattgggatgaccgg
gcagttgttgcagatgatccacattttcagggtaggggaaacaaaagtagtggagataat
tttcatgctgccccaaacattgatcattcacaagaatttgtgagaaaggatctcaaagaa
tggttactctggctaagaaaagagatcgggtatgatggatggaggcttgattttgtgaga
ggattttggggtggttatgtgaaggattacttggatgcaagtgaaccttattttgctgtt
ggtgagtattgggattccctcagttatacatacggtgaattggatcacagtcaagatgca
catcggcagagaattgttgactggattaatgccaccagtgggactgctggtgcatttgac
gtcaccacaaaagggattcttcatacgacactggaaaggtgcgagtattggcgattatca
gatcagaaaggaaagcctcctggggttgtcggatggtggccatctcgtgctgttaccttc
atagagaatcatgacactggttctacccagggtcattggagatttcccagtggaaaagaa
atgcaaggatatgcttacatcttgactcatccaggaacaccagcagtgttctatgatcac
atattttctcattatcaatctgaaattgcagctctcatctctctaagaaaccggaacaaa
atccactgtcggagcactgttaaaattaccaaggcggagagggatgtgtacgcagccatc
attgatgagaaagtggcggtgaaaattggaccgggtcattacgaaccgccaagtgggccc
tacagttggtcttcaaaaatcgaagggaggaattacaaggtctgggaagcatcttaa
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