Populus nigra (Lombardy poplar): 133697117
Help
Entry
133697117 CDS
T10372
Name
(RefSeq) AP3-complex subunit beta-A isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133697117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133697117
Membrane trafficking [BR:
pnz04131
]
Endosome - Lysosome transport
Others
AP-3 complex
133697117
Endosome - Golgi transport
133697117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C
AP3B1_C_2
TPR_TNPO3_IPO13_3rd
HEAT_2
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
133697117
NCBI-ProteinID:
XP_061975463
LinkDB
All DBs
Position
6:complement(3225344..3235366)
Genome browser
AA seq
1119 aa
AA seq
DB search
MFTQFGATADTLSKASTLMFRFGTDAHLYDDPEDVNIAPLLDSKFDSEKCEALKRLLALI
AQGFDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINSFQKDLGDTNPL
VRAWALRTMAGIRLHVIAPLVLVAVGKCAKDMAVYVRKCAANALPKLHDLYLEENSSTIE
EIVGTLLSDSSPGVVGAAAAAFTSVCPNNYSLIGRKYRRLCEILPDVEEWGQIVLIGILL
RYAIARHGLVKESIMFSLHGGERSHSEKDDSDDDFAFKNDVSGTSGKYDSDLARTISRCY
IEGPDEYLSRSSYANRISFEFNEAKFTSGRSNDEVKILLQGTSPLLWSNNSAVVVAAAGV
HWIMAPREEVKRIVKPLLFLLRSSNTSKYVVLCNIQVFAKAMPSLFSLYFEDFFVVSSDS
YQIKALKLEILCSIATDSSISSIFKEFQDYIRDPDRRFSADAVAAIGLCAKQIPNMASTC
LEGLLALAKQDLSTCDPGSTNGEAGILIQAIMSIKSIITQDPPTHEKVVIQLVRSLDSIK
VPAARATIIWMIGEYRNLGEIIPRMLTIVLKYLAWSFTSEALETKLQILNTTVKVLSGAK
GEEMQTFKKLGSYVIELAECDLNYDVRDRARFLKKLLPCSLDSGELELDTDCLPKKQDLP
QVLAECMFQGQARQLSPESMDYRVYLPGSLSQIVLHAAPGYEPLPKPCSVLDHDLDTNVI
RGVDTLGEGEDGTDSLSGSSYEESASDYSSERSMTVSSGDGGSDETSSTSEVDNTDPLIQ
LSDTGDANQNQNGAPQSASTDLEELMSKRSLETWLDAQPGLSILSTSEQSQLRKSSARIS
IRDISSRVKPKSYRLLDPANGNGLKVDYSFSPEISSISPLLVSVEVSFENCTDETISEVT
LVDEESSKASDSSESSPSHKDVPTLVPMEEIASLEPGQTVKKIVYVCFHHHLLPLKLALY
CNGKKLSVKLRPDIGYFVKPHPMDVEAFTNKESRLPGMFEYTRSFTYVDHIGELNKESGD
NALVKDNFLLVCESLALKMLSNANFSLVSVDMPISAKHDDVSGLCLRFSGEILSNSMPCL
ITITAEGKCSEPLNMLVKVNCEETVFGLNLLNRIVNFLS
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtttacacaatttggtgcaacagctgacacactgagcaaggcatcaacactcatgttt
cggttcggcaccgacgctcacttatacgacgatccagaagacgtgaacatcgcaccctta
ctcgatagcaaattcgactccgagaaatgcgaagctctcaaacgcctcctcgctctcatc
gctcaaggcttcgacgtttccaatttcttccctcaggttgttaaaaatgtggcatctcaa
tcactggaagttaagaagctggtttacttgtacctgctacactatgctgagaagcgtcca
aatgaagcattgctatcaatcaattccttccaaaaggacctgggagatacaaatccattg
gtgagagcatgggcattgcgtactatggctggaattcgcttacatgtaatagcaccactt
gttctggtggctgtgggaaaatgtgccaaggatatggctgtttatgtgagaaaatgtgct
gccaatgctcttcctaagttgcatgatttgtacctcgaggaaaattcctctacgattgaa
gagattgttggaacattgttaagcgacagttcacctggagtagttggagctgctgctgcg
gcgtttacttctgtgtgtccaaataattattctttgattgggagaaaatatagaaggtta
tgtgagattcttcccgatgtggaagagtggggtcagatagtattgattggaatacttttg
cgctatgcaatagcaaggcatggccttgtgaaagaatccataatgttctctttacatgga
ggagaaagatcccattctgaaaaggatgattcagatgatgactttgcatttaaaaatgat
gtcagtggcacgagcgggaagtatgattctgatttggcacggacgatctctagatgttat
attgaagggcctgatgaatacttgtcaaggtcaagttatgctaacaggatttcctttgaa
ttcaatgaagcaaaatttacgtctggcagaagtaatgacgaggtgaaaatcctacttcag
ggtacatctcctctgctatggagcaacaatagtgcagtggttgtcgcagcagctggtgta
cactggatcatggccccaagggaggaagtcaaaagaattgttaaaccacttttgtttttg
ctgagatcatctaacacttcaaaatatgtggtcctttgcaacattcaagtgtttgctaaa
gcaatgccttctctcttttctctgtactttgaagacttctttgtagtttcttcagattca
taccaaataaaagctctgaagctggagattctttgttctatcgctactgattcatctatc
tcatccatcttcaaagagtttcaggattacattagagatccagacaggagattttcagct
gacgctgttgctgctattggtttatgtgcaaaacaaattcctaatatggccagcacatgc
ttggaaggactgttggctctggctaaacaggatttgtcaacctgtgaccctgggtctact
aatggagaagctggtattctaattcaagctataatgtcaattaaatcaattattacacaa
gatccccccactcatgaaaaggttgtaatccagttggtccgcagtttggattcaatcaaa
gtgccagcagcccgtgcaacaataatttggatgataggagagtacaggaatttaggggag
ataatcccaaggatgctaaccattgtactgaagtatcttgcttggagctttacttcagaa
gcattggaaacaaagcttcagattcttaacactaccgttaaggtgctatcaggtgcaaaa
ggggaagaaatgcagacattcaaaaaactagggagctacgtgattgaactagccgaatgt
gatttgaactatgatgttcgcgacagagctcgctttttgaaaaaacttctgccgtgcagt
ttagatagtggagagctggagctagatacggactgtctacccaagaagcaggacctgcca
caagtacttgcagaatgcatgtttcagggacaagctagacaactgtcacctgaaagtatg
gattatcgggtctatcttcctggatctctctcacagatagtccttcatgcagctccagga
tatgagcctctcccaaaaccttgcagtgttctcgatcacgatcttgatacaaatgtgatt
cgtggtgtggacacactaggtgagggggaagatggcactgactcattatctggatcatca
tacgaggaaagtgcttctgattatagctctgaacgttctatgactgtttcaagtggggat
ggtggcagtgatgagactagttcaacaagtgaggttgacaacactgatccattgattcag
ttgtcagatactggtgatgctaaccaaaatcagaatggagctcctcaatctgcttctact
gatttggaggagctgatgtcaaagagatctctagagacatggttggatgcgcagcctggt
ttatcaatcctgagcacatcggaacaaagtcaactccgtaaatcttcagctagaatctcc
ataagggatattagcagtcgagttaaacctaaaagctacagactcttagatcctgctaat
ggaaatggattaaaggtggattattcattttcaccagaaatttcaagcatatcaccctta
cttgttagtgtagaagtttcctttgagaactgtaccgatgagaccatttcagaagtaacc
ttggtggatgaggaatcaagcaaagcttcagattcttctgagagctcaccatctcataag
gatgtgccaacactggttcctatggaagagattgcttcactggaacctggtcagacagta
aaaaagattgtctatgtttgtttccatcaccatctattgcctctgaagctggcgttatat
tgcaatggcaagaagctttctgttaagttgcggcctgacattggatattttgtgaaacca
catccaatggatgttgaagctttcacaaataaggaatcacgtctcccaggaatgtttgag
tacaccaggagtttcacttacgtagaccacattggggagctcaacaaggagagtggtgac
aatgcgttagtgaaagacaattttctattggtctgtgaaagcctagcattaaagatgctt
agcaatgcaaatttttctctcgtatctgttgacatgccaatttctgccaaacacgatgat
gtctctggtttgtgcttacgattcagtggtgaaattctgagcaactcaatgccttgcttg
attaccattactgctgaaggtaaatgctctgaaccgttaaacatgttggtaaaagtcaac
tgtgaggaaactgtatttggcctaaatctgttgaataggatcgtcaatttccttagttga
DBGET
integrated database retrieval system
