Populus nigra (Lombardy poplar): 133697134
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Entry
133697134 CDS
T10372
Name
(RefSeq) phytochrome B-like
KO
K12121
phytochrome B
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04712
Circadian rhythm - plant
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133697134
NCBI-ProteinID:
XP_061975497
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Position
6:complement(7044745..7051742)
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AA seq
1134 aa
AA seq
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MASQSQRQSNQPAHNQAQSSGTSNMRQHHHATESVSKAIAQYTVDAQLHAVFEQSGGTGK
SFDYSKSVRTTNQSVPEQQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML
GLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPF
YAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVV
DSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRV
RMIVDCHAIPVRVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGND
EEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHV
LRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVE
WLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTEKEVKWG
GAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEAT
NSKAVVHTQLEDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTG
LSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVV
NACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENT
CCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGIDTDK
LPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIAIPELQQTLKVQKQQEKKNFAR
MKELAYICQEIKNPLSGIRFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESI
ENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVL
ADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFKIVCPGEGLPPELVQDMFHS
SRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPMPQKVGRGAAD
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacaatcacaaaggcaaagcaatcagccggcccataatcaagctcagtcttcg
ggtaccagtaacatgaggcaacaccatcacgccacagaatcagtaagcaaagcaattgca
caatacacagtcgatgcacaactccatgcagtttttgaacaatctggtggcactggtaag
tcatttgattactcaaagtctgttagaactactaaccagtcagtacctgagcaacaaatc
acagcgtatttgtcaaaaattcaaaggggtggtcatattcagccatttgggtgcatgatt
gctgcagatgaacagtcttttagggtcattgcgtatagcgaaaacgccaaagatatgctt
ggtttaactccacaatcagtcccttctttagagaaacaagaaattctctttgttggggct
gatgtaaggattctttttaggccttccagcgccgttttgcttgaaaaagcatttggtgca
agggaaataacattgttgaatccaatttggattcattccaagaattccgggaagcccttt
tacgcaattttgcataggattgatgttggtattgttattgatttagagcctgctaggact
gaagaccctgctttatctatagcaggggctgttcagtctcagaagttagcagttcgtgcg
atttcacaattacaatcacttcctggtggggatattaagttattatgtgatactgttgtg
gacagtgtgagagagcttaccgggtatgatagagttatggtttataagtttcatgaggac
gagcatggtgaggttgtcgctgagaataaaagggttgatttggaaccttatatcggtttg
cattatccttccacggatataccacaagcttcgaggtttttgttcaagcagaatagggtt
aggatgattgtggattgtcatgctataccggtccgtgttattcaggatgaggggcttatg
cagcctttatgcttggttggttcgactcttcgtgctcctcacggttgtcatgctcagtat
atggagaatatggggtcgattgcttcattggccatggctgttattatttatggaaatgat
gaagaagctatcggtgggaggaactcgatgaggctttggggtttggttgtttgccatcac
acttctgctaggtgtattccatttccgcttcgttatgcgtgtgagttcttaatgcaggct
ttcgggcttcaattgaacatggaattgcagttggcatcgcagttgttggagaaacatgtc
ttgaggactcagactctcttgtgtgatatgcttctccgcgactctcctactggcattgtt
actcaaagtccaagtatcatggaccttgtgaagtgtgatggggcagctctttattaccag
gggcagtattacccattaggcgtaaccccaactgaagcccaaataaaagatattgtggag
tggttgttgacccttcatggagacccaactggattaagcactgacagtttggctgatgct
gggtatcctggggcagcctttcttggcgatgcagtttgtgggatggctgttgcttatatt
gctgagagagattttcttttttggtttcggtctcacactgaaaaggaggtcaaatggggt
ggtgcgaagcatcacccagaggacaaggatgatgggcagaggatgcatccacgttcatca
ttcaaggcattcttagaggtggtgaagagccggagtttaccatgggagaatgcagaaatg
gatgccattcattctttgcagcttattttgcgagactcatttagggatgctgaagcaacc
aattctaaggctgttgtacatacccagctcgaggatatggaattgcaaggtatggatgag
ctcagttcggttgcaagagaaatggttagactaatagagactgcaactgctccgatattt
gctgtagatgttgatggccgcataaacgggtggaatgcaaaggttgctgagttgactgga
ctctcagttgaggaagccatggggaagtctttggttcacgatcttgtttataaggaatat
gaagaaattgttgacaagcttattcatcgtgcagtaaaaggcgaagaagataagaacgtg
gagataaaattgaggaccttttgctctgaacaccagaagaaggctgtttttgtggtggta
aatgcttgttcgagcaaggattacatggataatatagttggggtttgctttgttggtcag
gatgttacaggtcaaaaagtggtaatggacaaatatgtccttatacaaggtgattataag
gctattgtacacagtcccaatccttcgatccctccaatttttgcttcagatgagaacaca
tgttgcttggagtggaacactgccatggaaaaactcacaggatggtccaggggcgaagtt
gttgggaagatgctggttggggaggtttttggcagttgctgtaggctcaagggtccagat
gcactgacaaaattcatgattgccctgcacaatgcaattggagggatagatacagacaag
ttacccttttcattctttgaccggaatgaaaaaaatgtgcaaactctcttgacagctaac
aagagggttaatatggagggagatattattggagccttctgcttcttgcagattgcaatt
cctgagttgcagcaaactttgaaagttcagaaacagcaggaaaaaaaaaactttgcaagg
atgaaagagttggcttacatttgccaggaaataaaaaatcctttgagtggtatacgcttt
accaactcacttttggagaacacagacttgactgaggatcaacagcagtttctcgagact
agtgctgcatgtgaaaaacagatattgaagatcatacgagacattgatcttgagagcatt
gaaaatggttcactggagcttgagaaggctgaatttttacttgggagtgtcataaatgct
gttgttagccaagcaatgcttttgctgagggaaagaaatctacaattgcttcgtgatatt
ccagaagaaataaaaacgctggcagtttatggtgatcaggcaagaattcaacaagtattg
gctgatttcttgttgaatatggtgcgttatgctccatcttcagcaggttgggtggagatt
catgtttgtccaacactgaagcaaatctctgatggacacactctcgtgcatacagagttc
aagattgtttgccctggtgaaggtcttcctcctgaattagttcaagacatgttccatagc
agtagatgggttactcaagagggcctagggctcagcatgtgcaggaagatcttaaagcta
atgaatggtgaagtccaatatattagagagtcagaaagatgctatttcttagttgtcctc
gaagtacccatgcctcaaaaagttggaaggggtgctgcagactag
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