Populus nigra (Lombardy poplar): 133697147
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Entry
133697147 CDS
T10372
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnz01009
]
133697147
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133697147
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pnz04040
]
133697147
Protein phosphatases and associated proteins [BR:
pnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133697147
Membrane trafficking [BR:
pnz04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
133697147
Ion channels [BR:
pnz04040
]
Chloride channels
Chloride channel (CLC)
133697147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
133697147
NCBI-ProteinID:
XP_061975517
LinkDB
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Position
6:11174308..11183081
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AA seq
799 aa
AA seq
DB search
MLSNQLHNGMETAKLLWSRIPSSEDGEVDGVSMLRTSNGNTAESLDYEVIENQAYRYEQA
QRGKLYVGYQVVVKWFLALLIGIGTGLAAVFINISVENFAGWKFSLTFSIIQRSYFAGFV
IYVLINLVLVFSSVYIVTHFAPAAAGSGIPEIKGYLNGLDIPGILLFRTLIGKIFGSIGS
VGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLSLRWLQVFKSDRDRRDLVTCGCAAGV
AAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKSGKCGHFGSGG
FIIWDTSGGQEDYSFGELLPMAVIGVIGGLLGALFNQLTLHITYWRRNYLHKNGNRVKII
EACLISVITSAISFGLPLLRKCNPCPESDPDSGIECPRPPGMYGNYVNFYCGKDKEYNDL
ATIFFNTQDDAIRNLFSAKTIHEFSAQSLLTFLVMFYTLAVVTFGTAVPAGQFIPGIMIG
STYGRLVGMFVVNFYKKLNVEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPL
IMLVLLISKAVGDAFNEGLYEQQARLRGIPLLESRPKYQMRNMKAKEACGNQKVVSFPRI
VKVADVVSILQSNIHNGFPVTDHTRNGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCDPA
GVSKSIRHNFSEFVKPVSSKGISIEDIHLSSDDLEMYIDLAPFLNPSPYVVPEDMSLTKV
YNLFRQLGLRHIFVVPRASRVVGMITRKDLLIEDNEDSANVELQSTSVRGHRQYRMISRN
VDVERPLLNGLLVQDHMLG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgaatcaattgcataatggaatggagactgcgaagctattgtggtctcggatt
ccaagctcagaggacggtgaggttgacggtgttagcatgttgagaaccagcaatggaaac
actgctgagagtcttgactatgaagttatcgagaatcaggcgtatcgatacgagcaggcg
caaagagggaagctttatgttggatatcaagtggtagttaaatggttcttagctttgctc
attggtattggtactggattagcggctgttttcatcaatatatctgtcgagaattttgct
ggctggaagttttctttgacgttttcaataattcagagatcatattttgctggatttgta
atatatgtattaattaacttggttttagtcttttcatctgtatatatcgttacgcatttt
gcacctgcagcagcaggttctggtattccagaaattaagggttatttgaatgggcttgat
attcctggtattctactcttcagaactttgattggaaagatatttggaagcattggttct
gtgggaggtggccttgctttaggaaaagaaggtcctcttgttcatactggtgcttgtatt
gcttccttgcttggacaaggtggatctacaaaatatcatctaagtttgaggtggcttcaa
gttttcaagagtgatcgcgatcgtcgtgatcttgtgacctgtgggtgtgcggctggtgtt
gctgctgcttttagagctccagttggtggtgtattatttgctttggaagaagttacatcc
tggtggaggagtcaactcatgtggcgtgtcttttttacctctgctgttgtggcggttgtg
gtgcgtactgctatgggatggtgtaagagtgggaagtgtgggcattttggctccggtggt
ttcataatatgggacacgtcaggtggtcaagaggactattcttttggggagttacttcca
atggcagttattggggttattggtggtctacttggtgcgttattcaatcagcttacgctt
catataacctactggcgacggaattatctgcataagaatgggaaccgagtgaagattatt
gaagcatgcctcatctctgttattacttcagctatttcctttggactaccacttctaaga
aaatgcaatccatgccctgaatcagatcccgactctggcattgaatgcccaaggccccca
gggatgtatggaaattatgtaaatttttactgtggcaaggacaaggaatacaatgatctt
gcaacgattttctttaatactcaggatgatgccattaggaatctgtttagtgcaaagaca
atccatgagttcagtgcccagagtttattgacgtttctggttatgttttatactttagca
gtggtgacatttggtactgcagttcctgctggccagtttatccctggaattatgataggc
tccacgtatgggcgcctggttggcatgtttgttgttaatttttacaagaagctcaacgtt
gaggagggaacatatgcactgttgggagcagcttcttttcttggaggttcaatgcgaatg
actgtctctttatgtgtaattatggttgagatcacaaacaacttgaaacttttaccttta
atcatgcttgttctcctgatatcaaaggctgttggtgatgcattcaatgaaggtctttat
gaacaacaagcacgattgagaggaattccactgttggaatctagacctaaataccaaatg
agaaacatgaaggcaaaggaagcttgtggaaatcagaaggttgtctcctttccccgtatt
gttaaggttgcagatgttgtttctattttgcagagcaacatacacaatggctttcctgtg
actgatcacacgagaaatggggaaacacttgtaattggacttgtgcttcgcagtcatttg
ctagtccttctccaatccaaggtggattttcagcatagtcctttaccatgtgatccagca
ggtgtatcgaaatcaatcaggcacaacttcagtgagtttgtgaaacctgtttccagtaaa
ggaatttctatagaggatattcatttaagttcagatgacttggaaatgtacattgatctt
gccccatttttgaacccctctccatacgttgtccctgaagatatgtctttaacaaaggta
tataatcttttccgacaactagggttgaggcatatatttgttgttcctcgtgcatctcgg
gtagttggaatgattacaagaaaggacttgctgattgaggataacgaggattcagctaat
gtggagctccaatcaactagtgtaagagggcaccgtcaatataggatgatctcgaggaat
gtggatgtggagcgccctcttcttaatggtcttctagttcaagatcatatgcttggttga
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