Populus nigra (Lombardy poplar): 133697371
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Entry
133697371 CDS
T10372
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
pnz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133697371
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133697371
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnz01009
]
133697371
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133697371
03036 Chromosome and associated proteins [BR:
pnz03036
]
133697371
Protein phosphatases and associated proteins [BR:
pnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133697371
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133697371
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133697371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EF3_N
HEAT_EZ
PDS5
RTP1_C1
Adaptin_N
SCD
TAF6_C
CLASP_N
Cnd1
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
133697371
NCBI-ProteinID:
XP_061975838
LinkDB
All DBs
Position
6:complement(8271042..8277542)
Genome browser
AA seq
587 aa
AA seq
DB search
MSTMEEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLALAEELGVFIPYVGGVEYAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRET
DLVDWFIPLVKRLAAGEWFTSRVSACGLFHIAYPSAPEMLKTELRSIYSQLCQDDMPMVR
RSAASNLGKFAATVESVHLKADILSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPEHAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMEHIIPQV
LEMSTNPHYLYRMTIIRAVSLLAPVMGSEITCSKLLPVVVNASKDRVSNIKFNVAKVLQS
LIPIVDQSVAEKTIRPCLVELSEDPDVDVRFFANQALQTIDSVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgatggaagaaccactatatcctatagccgttttgatagatgaattaaagaat
gatgacattcagctacggttaaactcgatacgtagactatcgactattgcacgtgctctc
ggggaggaacgaacccggaaggagttaattccatttttgagtgaaaataatgatgatgat
gatgaggtactccttgcattggcggaggaattgggggtgtttattccttatgttggggga
gttgagtatgctcatgttttgcttccacctctggagactctctgcactgttgaggaaacc
tgtgtgagagataaagctgtggagtcgctgtgtaggattggatctcagatgagggagact
gacctggttgattggttcattcctcttgtcaagagactggcagctggggaatggtttacc
tctcgagtttctgcatgtgggctatttcatattgcctaccctagcgccccagagatgttg
aagacagagttgcggtcaatatacagtcagttgtgtcaagatgacatgcccatggttagg
aggtctgcggcctctaatttggggaaatttgctgccactgttgaatctgtgcatttgaag
gctgacatcctgtcaatttttgaggaccttacccaagatgatcaagattctgttcgttta
ttggctgtcgagggttgtgctgctcttgggaaattattggagcctcaggattgtgttgca
cacattcttcctgttattgttaatttctctcaggacaagtcttggcgtgtacgctacatg
gttgcaaatcaactgtatgaactttgtgaagctgtggggcctgagcctaccaggacggac
ttggtccctgcatatgtgcggttacttcgtgataatgaggctgaagtacgtatagcagct
gctggaaaagtaactaaattctgccgcattttaagtccagaacatgctattcagcatatt
ctcccctgtgtgaaggaactgtcatcagattcttcccagcatgtccgctctgctttggct
tcagttataatgggaatggctcctgtcttggggaaggatgccacaatcgaacagcttctt
ccaatttttctatccctcttgaaggatgaatttcctgatgtgcgactgaacatcatcagc
aagcttgatcaagtcaatcaggttattgggattgatctactatcccaatcactattgcca
gcaattgttgagcttgcagaggataggcattggagggttcggcttgcaattatagagtac
attcctttattggcaagtcaattgggtgttgggttctttgatgataaacttggcgctctt
tgcatgcagtggttacaggataaggtttattcgattcgcgatgctgctgcaaacaattta
aagcgccttgctgaggaatttggtcctgagtgggcaatggagcacataattccacaggtt
ttggagatgagcaccaatccccattatttgtaccggatgacaattatacgagctgtctcg
ttgcttgctcctgtcatgggttcagaaattacatgttctaaactgctgccagtggtcgtc
aatgcatcgaaagacagggtgtcaaatatcaagttcaatgtggcgaaggtgctgcaatcc
ctcattccaatagttgatcagtctgttgcagagaagacaatccgtccctgtttggttgag
ctcagtgaggacccagatgtcgatgtccgttttttcgcgaaccaagctcttcagactatt
gatagtgtcatgatgtctagctag
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