Populus nigra (Lombardy poplar): 133697428
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Entry
133697428 CDS
T10372
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133697428
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133697428
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
133697428
NCBI-ProteinID:
XP_061975949
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Position
6:complement(10470964..10475021)
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AA seq
547 aa
AA seq
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MAAASSSAPFFGRAREEHQNQIIQQHSSTATSSTVPTTGPQKKRRNQPGTPNPDAEVIAL
SPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKVYLCPEPTCV
HHDPSRALGDLTGIKKHYFRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGT
LFSRRDSFITHRAFCDALAQESARHPTSLNTIGSHLYGNNHMSLGFSQVGSQISHLQDHH
PSGNNMLRLGSAGAANFEHLIPPPNPPSMPMMPPSGFFMGDANQGPFPNKSLHGLMQLPD
LQSNTNNPASASNMFNFGFFSNNSNTGRTSNNDNANTGSTTTNLVSPGLLNANQFNNVNG
AGQRTSVFPTNMSGDHVGSAMSSLFNTSMQQENITPHVSATALLQKAAQMGSTTSSNSPS
GLLRSLGSSSTTGAKSIRPLVSTNFGSSFSNANVGESLETHMESESQLQGLMNSLANGSS
SIFGNEQDISYTGFDSSSFSKADEGNMHQGLAGSDKLTLDFLGVGGRVRNIGGGFPQRQQ
QNGINNI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcttcgtcatctgcacctttcttcggccgggcaagggaagaacatcaaaac
cagataatacaacagcattcttcaacagccacttcctctacagttccaaccacaggacct
caaaagaagagaagaaatcaacctggaacaccaaatccagatgcagaagtgatagcgcta
tctcccaagactctaatggcaacaaacaggttcatatgtgaggtatgcaacaaagggttc
caaagggagcaaaacctacagctccacagaagaggacacaacctgccttggaagctaaag
cagaagactacaaaagaagtgaagaggaaggtgtatctgtgtcccgagcccacatgtgtt
caccatgatccttctagggctcttggtgaccttactggcataaaaaaacactactttaga
aagcacggtgagaagaaatggaagtgtgagaaatgctcaaaaagatatgctgttcaatct
gattggaaagcccattctaagacttgcggtactagagaatacagatgtgactgtggcact
cttttctcaaggcgtgatagttttatcacacatagagctttttgtgacgcactagctcag
gaaagtgcaaggcatcctaccagcttaaatactataggaagtcatctgtatggaaataac
cacatgagcttaggcttctctcaagtgggttcccaaatttcccatttacaagatcaccac
ccatctggtaataacatgttacggctgggcagtgctggcgcagccaatttcgagcatcta
atccctccacctaaccctccttcaatgcccatgatgcctccatctggtttcttcatggga
gatgcaaaccaagggccatttccaaacaaatctttacatgggctaatgcaacttcctgat
cttcaaagcaacactaacaaccccgcctcggcttccaatatgtttaacttcggcttcttt
tcaaataatagtaacacaggccgtacaagtaacaatgacaatgccaacactggaagcaca
accacaaacttagtgagtcccggattgttaaatgctaaccagttcaacaacgtcaatggt
gctggccaaaggacatcagttttccccaccaacatgagcggtgatcatgttggatcggct
atgtcttcccttttcaatacttcaatgcaacaagagaacatcacaccgcatgtgtctgcc
actgcattgcttcaaaaagcggctcagatgggttcaactactagcagcaacagtccaagt
ggtttactgagaagcttgggaagttcttcaacaactggtgctaaatctattaggccactt
gtttccaccaactttggcagcagtttcagcaatgcaaatgtaggtgaaagcttagaaaca
cacatggaaagtgaaagccaacttcaaggattgatgaattctcttgccaatggaagctca
tcaatttttggaaatgaacaggacatcagctacactgggtttgatagctcaagttttagc
aaagcagacgaaggaaatatgcatcaaggtcttgctgggtcagataaactgaccttggat
tttttgggtgttgggggcagagtaagaaacattggtggagggtttccacaaagacagcaa
caaaatggcatcaataatatataa
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