KEGG   Populus nigra (Lombardy poplar): 133697481
Entry
133697481         CDS       T10372                                 
Name
(RefSeq) DNA polymerase lambda isoform X1
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03410  Base excision repair
pnz03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    133697481
   03450 Non-homologous end-joining
    133697481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133697481
Enzymes [BR:pnz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     133697481
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     133697481
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     133697481
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 BRCT HHH_5 IMS_HHH_1 NTP_transf_2 PTCB-BRCT
Other DBs
NCBI-GeneID: 133697481
NCBI-ProteinID: XP_061976043
LinkDB
Position
6:complement(10817673..10826188)
AA seq 538 aa
MAPKRKKSPSIDPQGIFSGMVVFLVETGVQSRRLQIWKQKLVQMGATTEERLSKKVTHVF
AINSQALLQQLDGQLLKRFKPRVLLYQWLEDSLRSGEKVSEDQYHLLVDMEGENTKDKSL
VLKLVNENTSSADELSPHNEKIKSDVKKFKSDAENKGSFEVPNSPGSSDSSPLSQTLTNP
IPSSTLHSDLSLPYSPPDLNRSITEIFGKLINIYRALGDDRRSFSYYKAIPVVEKLPFKI
ESADQVKDLPGIGKSMQDHKIMGAIGCMQIQEIVTTGKLSKLEHFETDEKVRTISLFGEV
WGIGPATALKFYEKGHRTLEDLKNEDSLTHSQKLGLKYFDDIKTRIPRHEVQEMELLLQK
TGEEILPGVDILCGGSYRRGKASCGDLDIVITHPDGKSHKGFLTRYVKRLKDMKFLREDL
IFSTHSEEGTDSGVDTYFGLCTYPGRELRHRIDFKVYPRDIYAFGLVAWTGNDVLNRRLR
LLAESKGYRLDDTGLFPATQASGGKRGARASASLRFDNEKEVFDFLGFPWLEPHQRNQ
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggcgccaaagcgaaagaaaagtccttcaatcgatccccagggaattttctctggaatg
gttgtgtttttggtcgaaactggagtccagtcacgtcgcttacagatttggaagcagaag
ctggtccaaatgggtgctactactgaggagcgcttatcaaagaaagtcactcatgttttt
gctattaattcacaggcccttctccaacaattggatggacaacttctaaaacgctttaaa
ccaagggttctcctctatcaatggctagaggacagtttgagatcaggggagaaagtttcc
gaggatcaatatcatcttctagttgacatggaaggagagaatacaaaagacaagtctttg
gttttgaaattagtcaatgagaacacttccagtgccgatgaactgtcacctcacaatgaa
aagatcaaatctgatgtgaagaaattcaaatcagatgcagaaaataaaggttcgttcgag
gtgccaaatagtcctggaagttctgacagctcacctctctcacaaacccttaccaatcca
ataccctccagtactctgcattcggatttatctttgccttacagtccacctgatttaaac
aggagcataactgagatatttggaaaactcatcaacatatacagggctttgggtgacgat
agaaggtcattcagctattacaaggctattcctgttgttgagaagttgccatttaaaatt
gagagtgcagaccaggtcaaagatttgcctggcataggaaagtcaatgcaggatcataag
attatgggtgccattgggtgtatgcagatccaggagatagtcactactgggaaattatcc
aagttggagcactttgagacagatgaaaaggtacggacgattagtttatttggggaagtt
tggggtattggtccagccacggccctaaaattttatgagaagggtcatcgcacgctagag
gatctgaagaatgaagattcactgacacattcacagaagttaggattaaaatattttgat
gatattaagacgaggattccacgccatgaggttcaagaaatggaactattgctacagaaa
actggtgaagagattttacctggggtcgacattttatgtggaggatcatatagacgcgga
aaagcttcttgtggcgatttggacatcgtgattacgcaccctgatgggaaaagtcataaa
ggttttctaacaagatatgtgaagcgtttaaaggatatgaaattcctaagagaggatttg
attttcagtactcacagcgaggagggtactgattcaggtgttgacacatatttcgggctt
tgcacatatcctgggcgagaactgcggcaccgaatagactttaaggtttatccaagggac
atttatgcttttggtctagtagcatggacagggaatgatgtattaaacaggaggctgaga
ctgctagcagaatccaaaggatatcggcttgatgatactggattatttccagctacccag
gcttcaggtggcaagcgaggtgcaagagctagtgcaagtctgagatttgacaatgaaaag
gaggtgtttgatttcctaggctttccttggcttgaaccgcatcaaagaaatcaatga

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