KEGG   Populus nigra (Lombardy poplar): 133697543
Entry
133697543         CDS       T10372                                 
Name
(RefSeq) uncharacterized protein LOC133697543
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
pnz  Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133697543
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    133697543
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 BRCT
Other DBs
NCBI-GeneID: 133697543
NCBI-ProteinID: XP_061976156
LinkDB
Position
6:complement(20030315..20038548)
AA seq 1139 aa
MGSLGDDDDGEIKAGREDPNANFAPSYTQPFDSQFLPSPLPGEKGEDANELQFLQSTMLF
EDTVRVEDAFETQVVDLGGETQALDDLDWFQNVDTQLIDEIIDSDGEGTDRTEVLDDGNE
LSDDESGRRGKCESLDGEKIQDTSLSKRGEKGLVEQSDALTDEQHLSGSALKYTSVRVES
LRVSGIAARGSASNGTNNSDSCSLVTDGQISEQFTVNTNGSKTKIPEEVVWRHDMGRSDD
EVKEFSNGSRCNIGCSAMRKLFAENSFIETKGHFVGGKEVPICDDGVAGLSYIDSQEPGD
LSQADALLCVQKLIEESKVLFDEVDLGKIDRRKSSHISAAKGVQSLAKKTTDGGTKGKSR
IFDWDDGLEDEGGGDIFRRRKEMFFGTANLGKRSFMKPSKSKGNQLGVCRDNEGKSNVQN
VIEVHSESKIDLCGLRANKKMMQETETNVSRNLFNKFDEQPEADTSAGQLEALTRKEVPE
MLDIGLDTQMAAEAMEALFHGEGIAYDATNDGQQIPAVNSKDLMEGSLRSKAKKSIHSKQ
HSLSNNEDIGVTTHQSKKTLKISAKLVKQSLTPSQKCPENVRKQCDMDVVMTRSKRARSD
AGLDELDRCNGTASRGHRSVKKQDLPVELATSTPVAHRTRQSLAVSKLKSAENVSIDNRE
KPNSQVELGGCEWHKAGVVDVEASEVLNAKGNSSGLGSSQPGEPKTSKSRLLATDNYISF
PRRKRSRQNLSGQLDEPHNLHAQSKPSCQTGISTDLNMKKKTRSSISVCPDMSPQHVHKS
GIDGTTYNYNSVDMNGKMSNNLMGVGASVNSSHRRSNADSSPSAANEVNVPSSDNLSREK
TKSYESACASPGICMTPVNAASPVCMGSEYKQSCRKNLSRACLVKEMSSLCAAWTGPISE
PKDTRKRRDLSDVRVLFSHHLDEDIIKQQRKIVDRLKVSIASSITDATHFVTDKFVRTRN
MLEAIASGKPVVTHLWLENVGQANYYIDEQKYIVRDSKKEKEFGFNLAVSLAHARQHPLL
QGRRVLITPKTKPGKEIISSLVKAVRGQAVERVGRSTLKDDVVPDDLLILSCEEDYEVCV
PFLEKGAAVYSSELLLNGIVTQKLEYERHRLFADTVKRTRSTVWMKKDGHNFVPVTKRR
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgggttctcttggagacgatgacgatggtgaaattaaagcagggagagaagacccaaat
gccaatttcgccccttcttatacccaaccctttgattctcaatttttgccctctccattg
cctggtgaaaaaggtgaggatgccaatgagctgcaatttttacaaagtactatgcttttt
gaggatactgttagagttgaagatgcatttgagacccaagtagtggatcttggtggtgaa
acacaagcgttggatgacctcgattggtttcagaacgtggacacccaattgatagacgag
atcattgatagtgatggtgaaggaacagatagaactgaagttttggatgatggtaatgag
ctctctgatgatgaatctggaagaagaggcaaatgtgaatcattggatggggagaagatt
caagacacctctctttccaaacgtggtgagaagggattggtggagcagtctgatgctttg
accgatgaacagcatttatcaggatctgccctgaagtatacttcagttcgtgtagagtcc
ttgcgggtctctggtatagcagctcgcggtagtgcttcaaatggaaccaacaacagtgac
tcatgttctcttgtgactgatggtcagatttcagaacaatttactgttaacactaatggg
tcaaaaacaaaaattccagaggaagttgtttggaggcatgatatggggagatctgatgat
gaagtgaaggaatttagtaatggaagcaggtgtaatattggttgttctgcaatgagaaaa
ctcttcgctgagaattcctttattgaaaccaaaggacattttgtaggaggaaaagaagtt
cccatttgtgatgatggggtggcagggttaagctatattgactcccaagaaccaggagat
ttgtcacaagccgatgcgcttttatgtgtgcaaaagttaattgaagagagcaaggtattg
tttgatgaagttgacctggggaaaattgacaggagaaagtcaagtcacatttcagctgcg
aagggggtacaaagtttggccaagaaaaccactgatggaggcaccaagggaaaaagcagg
atttttgactgggatgatggactcgaggacgagggaggaggggatattttccgccgaaga
aaggaaatgttttttggtactgcaaaccttgggaagagatcctttatgaaaccctcaaaa
tccaaaggaaatcagttgggtgtatgcagggacaacgagggaaaatcaaatgtccagaat
gtaatagaggttcactctgagtcaaaaatagatttgtgtggtctaagagctaataagaag
atgatgcaagaaactgaaacgaatgttagtaggaatctttttaataagtttgatgaacaa
cctgaagcggatacatcagcaggacagttggaagctcttactaggaaggaggttccagaa
atgctagatataggtttggacactcaaatggctgctgaagctatggaagccttattccat
ggggagggcattgcttatgatgctactaatgatggccagcagattccagcagttaattcc
aaggatcttatggaaggatcactgagaagtaaggctaagaagagcatccattcaaagcaa
cattctcttagcaacaatgaggatattggagttaccacacatcaatcaaagaaaacattg
aagattagtgctaaactagttaaacaatctttaactccatcacaaaaatgtcctgaaaat
gtcagaaagcagtgtgatatggatgtagtaatgactagaagtaagagggccaggtcagat
gctggacttgatgagctggatagatgtaatggaactgcttcaaggggtcatcgctcagtt
aagaaacaagatttaccagtggagcttgctacttcaacaccagtcgctcaccggaccagg
cagtcattggcagtttctaaattgaaaagtgctgagaatgtgtccattgataatagagaa
aaacccaacagccaggttgagttgggtggttgtgagtggcataaagctggtgtggtagat
gttgaggcatctgaagtgttgaatgctaaagggaactcatcaggactgggttctagtcaa
cccggagaacctaaaacttccaaatcaagattgctagctacagacaattatatcagtttt
cccagaagaaaaagatctcgtcaaaacttgtcaggtcagcttgatgagccccataactta
catgctcaatccaaaccatcttgtcagacaggaattagcactgatttaaacatgaagaag
aaaaccagatcatccatatctgtttgcccagatatgtcacctcaacatgttcataaatca
ggcatagatggcactacttataattataattctgttgatatgaatgggaagatgtctaac
aatctaatgggagtgggtgcttcagtaaattcctctcacagaagaagtaatgcagattcc
tcaccatcagctgcaaatgaagtgaatgtgccaagttcagataatttgtcaagggagaaa
acaaaatcttacgaatcagcatgtgcttctcctggtatctgtatgacgcctgtgaatgct
gcatcacctgtttgtatgggcagtgaatataaacaatcatgcaggaagaacctgtcaaga
gcatgccttgtgaaagaaatgagtagtctatgtgctgcatggacaggacctatttctgaa
ccaaaagatacaaggaagagaagagatttgtctgatgttcgagtccttttcagccatcac
ctggatgaggacataattaagcagcagcgaaagatagtagatcgacttaaagtttcaata
gcttcctccattacagatgcaacacactttgttactgataaatttgtgcggacaaggaat
atgttggaagctattgcttctggaaaaccagtggtcacacatttatggcttgagaatgtt
ggacaagctaactattacattgacgagcaaaagtacatagtaagagactcaaaaaaggaa
aaggagttcggctttaacttggcagtttcattggcgcatgcgcgccagcatccgctttta
caaggtcgaagagttttgatcactcctaagacaaagccgggcaaagaaataatttccagt
ttggtcaaagcagttcgtggccaggcagtggagagagttggcagatccactctaaaggat
gatgtagtcccagatgatctgttaattttgtcttgcgaagaagattatgaagtctgcgta
cctttccttgaaaaaggggctgctgtctacagttcagagctgctgctgaatggaattgtt
actcagaagctggaatatgaaaggcaccggctcttcgcagacactgtcaagagaactcgt
tctacggtatggatgaaaaaagatggccacaatttcgttcccgtgacaaagcgtagatag

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