Populus nigra (Lombardy poplar): 133697554
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Entry
133697554 CDS
T10372
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnz03021
]
133697554
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
133697554
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
4HBT_2
Presenilin
Motif
Other DBs
NCBI-GeneID:
133697554
NCBI-ProteinID:
XP_061976171
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Position
6:8191900..8202112
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AA seq
824 aa
AA seq
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MNLRMLSLCRPEQWQSIRRDASFELMFPFDACFVIFSSFFFCKFQILLTIVPCLSSVQIQ
KVPTSIVELSIVTFNSHGSYSACLVQRSGWTRDVDIFLQWLSAIPFAGGGFNDAAIAEGL
SEALMMFPIDPNGSQTQSNIDEQRNCILIAASNPHPLPTPVYRPQIQNLEQTENIDAQNE
SRLSDAETVAKSFPQCSVSLSIICPKQLPKLRSIYNAGKRNSRAADPPVDSVKNPHFLVL
ISENFMEARAALSLPGVTSLTSNQTPVKVDIASVTSVTGPAPTSILSVNGSITKRPTISV
GNVPTATVKVEPSNITSMANGPTFPHNPSVPRPASQGVPILQTSSPSTTTQDMATSGDDV
QDLKPNVSVMTQSARPGPPAAANVSILNNISQARQVMNSAGLSGGTSLGLPSINQTSVAM
HMSNMISSGMASSVPAAPTVFSSGQPGVSSITGPGTLTGTTQIGPNSGLGSFTSATSNMS
GNSNLGRISQPMGNLQAGVSIGQSAPGMSQGNISGAQMVQSGMGANPNTMSSLGPSGVSF
GLNTMIPTPGMSQQVQSGMQPLGANNNSADNLSMSQQTAGGLQPAQSKYVKVWEGNLSGQ
RQGQPVFITRLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMN
QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISSQQQQQQM
QMQMQRQQQQLLQQQQQQQQHPQLLQQQQQQQQHQQQLPQLQQQQLSQQQQQQQHQLPQL
QQQQISGTGMGQTYVQGPGRPQLVSQGQVSSQGPANMPGGGFMS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttagaatgttatcactttgtaggcctgagcaatggcaatcaatccgacgagat
gcttcgtttgaacttatgtttccttttgatgcttgttttgttattttttcttcttttttt
ttctgtaaatttcagattttactgacaattgttccgtgtctttcttctgttcaaatacag
aaggtccctacttccattgttgagctctcaattgtcacgtttaattctcatggatcatat
tctgcttgcctagtacaacggagtggctggacaagagatgttgatatcttcttacagtgg
ctatcggcaattccctttgctggtggtggtttcaatgatgctgcaattgcagaagggctt
tctgaagctctaatgatgttccctattgatccaaatggaagccaaactcaatcaaatata
gacgagcaaaggaactgtattcttattgctgcaagtaacccacacccattgcccacacca
gtatatcgtccacaaatacaaaatttggagcagactgaaaatattgatgcacagaatgaa
agtcgtctatctgatgcagagacagttgctaaatcgtttcctcagtgctcggtttctctt
tcaatcatttgtccaaaacagcttccaaaacttaggtcaatctacaatgctgggaagcgc
aacagccgagcagcagatccacctgttgacagtgtaaaaaatcctcattttcttgtgtta
atctcggagaactttatggaggctcgtgctgcattgagtcttcctggagttacaagtttg
acttctaatcaaactcctgtaaaagtggatattgcttcagttacttctgtaactgggcca
gctccaacttctattctgtcagtgaatggatctatcacaaaacgaccaacaatttcagtt
ggaaatgttcccactgcaactgtgaaagttgagccaagtaatataacttccatggcaaat
ggacctacttttccccataatccttctgttccacgccctgcatctcaaggagttccaatc
ttgcagacttcttcgccatctactactactcaagatatggcaacaagtggtgatgatgtg
caggacttgaaaccaaatgtcagtgtgatgactcagtctgcacgtcctgggcctcctgct
gcagcaaatgtgagcattctgaacaatatctctcaagcacggcaagtgatgaactctgca
ggcttaagtggaggaacttctttaggtctcccatcaataaatcaaacttctgtggccatg
catatgtcaaatatgatttcgagtggaatggcatcttctgtgcctgctgctccaactgta
ttttcatctgggcaaccaggtgtctcttcgataacagggccagggactcttactgggaca
acgcaaattgggccaaactctggtcttggatcattcacttctgctacttctaatatgtct
ggaaattcaaaccttgggaggatttcacaaccaatgggtaatcttcaagcaggtgttagc
attggtcaatcagcaccaggcatgagccaaggaaatatttcaggagcacaaatggtacaa
agtgggatgggtgcaaacccaaacacaatgagcagtctgggtccatcaggtgtctctttt
ggtttgaacacgatgattcctacccctggaatgtctcaacaagtacaatccgggatgcag
cctcttggtgcaaacaataactcagccgataatttgtcaatgtcacaacaaacagcaggg
ggcttgcaaccagcacaatcgaaatatgtcaaagtctgggagggaaacttgtctgggcaa
cggcaagggcagcctgtctttatcaccagattagaaggttataggagtgcttcggcctct
gagacgcttgcagcaaactggccaccgacaatgcaaatagttcggcttatatctcaggac
cacatgaataacaagcaatatgtcggaaaggctgattttctagtttttcgggccatgaat
cagcatggatttcttggacaactccaagagaagaagctttgtgcagtaatccagttacca
tctcagacattgcttctctctgtttctgacaaagcctgccgcttgatagggatgcttttt
cctggggatatggttgtgtttaagccacaaatatccagtcagcagcagcagcagcagatg
cagatgcagatgcaacggcagcagcagcagctgctgcagcagcagcagcaacaacaacaa
catccacaactgctgcagcagcagcagcagcaacagcaacatcagcagcagcttccacaa
ttgcaacaacagcagctctcgcagcagcagcagcagcagcagcatcagcttccgcaattg
cagcaacagcaaatatctggaacaggaatgggtcaaacttatgttcaaggtccaggtcgt
ccacaattagtttctcaaggacaagtttcttcacaagggccagcaaacatgcctggagga
ggctttatgagttga
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