Populus nigra (Lombardy poplar): 133697611
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Entry
133697611 CDS
T10372
Name
(RefSeq) 26S proteasome regulatory subunit 8 homolog A-like
KO
K03066
26S proteasome regulatory subunit T6
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
133697611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pnz03051
]
133697611
Proteasome [BR:
pnz03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
133697611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_16
nSTAND3
AAA_lid_PRS2_C
PRS7_OB
AAA_22
RuvB_N
TIP49
AAA_28
AAA_33
NPHP3_N
AAA_3
Mg_chelatase
PhoH
AAA_14
AAA_18
OapC
Parvo_NS1
ATPase
AAA_24
ABC_tran
AAA_17
RNA_helicase
DUF815
IstB_IS21
AAA_19
AAA_7
AAA_25
DUF5906
TsaE
Sigma54_activat
bpMoxR
Zeta_toxin
AAA_11
Motif
Other DBs
NCBI-GeneID:
133697611
NCBI-ProteinID:
XP_061976270
LinkDB
All DBs
Position
6:10544713..10548374
Genome browser
AA seq
426 aa
AA seq
DB search
MATVGVERKQQQQTESTMTMIAEEGCSAKTGAARQGEGLKQYYLQHIHELQLLVRQKSHN
LNRLEAQRNGLNSRVRMLREESQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDK
SIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEI
KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ
KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQL
DGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNVDSRFDIVKIHSRRMNLMR
GIDMKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKETEKNMS
LRKLWK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgtaggagtggagaggaagcaacagcagcaaacagaatcaacgatgacgatg
atagcggaggagggctgctcggcgaaaacgggagcggcgaggcaaggagagggtttgaag
cagtactatctccaacacatccatgagcttcagctccttgtccgccaaaaatcccacaat
cttaatcgcctcgaagcgcaacgcaatggccttaattccagagtgaggatgcttagagaa
gagtcgcagctacttcaagagcctgggtcatatgttggtgaagttgtcaaagtaatgggg
aagaacaaggtgttagttaaggttcatccagaggggaagtatgttgttgatattgataaa
agtattgatatcacaaagatcactccatcaacaagggttgcccttcgcaatgacagctat
gttcttcacttgatcttgccaagcaaagtggatcctttggtcaacctcatgaaggttgaa
aaagttccagattccacctatgacatgatcggtggtcttgatcaacaaattaaagagatt
aaggaggtcattgaacttccaatcaaacaccctgaattgtttgagagtcttggaattgct
caaccaaagggtgttctcctttatggacctcctggcacaggaaaaactctactggccagg
gcagtggctcatcacactgactgtactttcatcagggtttctggttctgaattagttcag
aaatacattggagaaggctctagaatggtcagagagctttttgttatggcaagagagcat
gctccatcaatcattttcatggatgaaattgatagtattggatccgctcgaatggaatct
ggcagtggcaatggtgacagtgaggtgcagcgtactatgctggagctcctcaatcagcta
gatggatttgaagcatcaaacaagatcaaggttttgatggctacaaatcggattgatatt
ctggatcaagctctccttaggccaggaagaattgacaggaagattgaatttccaaatccc
aacgtggattcacgttttgatatcgtgaaaatccattcaagaaggatgaatttaatgcgt
gggattgatatgaagaagatagctgagaagatgaatggggcatctggtgcagagctcaag
gcggtgtgcactgaggctggaatgttcgctctaagagagagaagggtccatgttacacaa
gaagattttgagatggctgtagcaaaggtcatgaagaaggagacggagaagaacatgtca
ttgcggaagctctggaaataa
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