Populus nigra (Lombardy poplar): 133697621
Help
Entry
133697621 CDS
T10372
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133697621
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133697621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
133697621
NCBI-ProteinID:
XP_061976287
LinkDB
All DBs
Position
6:10456853..10462968
Genome browser
AA seq
613 aa
AA seq
DB search
MAASSSSAPFFGIREEDQNQQMKQQHSSTPTSSSAQAPPPQKKKRNQPGTPNPDAEVIAL
SPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKVYLCPEPTCV
HHEPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGT
LFSRRDSFITHRAFCDALAQESARNPPTNLNTIGSHLYGSSNMTLGLSQVGTQISSLQDH
NNQSTDVLRLGGGGARTGQFDHLLPSSIGSSSFRPPQQMPSPAFFMQEPNQNYHDENQSQ
QDLLQNKPFHHGLMQFADIHNTTGNPPSAGNLFNLSFLSNSSTASSISNGNNANNSNSNL
PTSGLLMPSTHFNNQNGAGGGEGSNIFSNNVMGNQMTSGVPSLYSSSVQNDNMVSHMSAT
ALLQKAAQMGSSSSNNSASLLRSFGSSSSSGNKSDRPLVGGNFSGMFSENENNLHDLMNS
FAPGNSSMFGSGHAQENPYGGYTASRTSLEQEKQHHGPNFGNTNMDEAKLHQSLNASIGG
SDRLTRDFLGVGPQIVRSMSGSSGFSQREKQQQPQRQHHGMDMGGSSLDSERHNANISAA
PTSQSFGGNGSFQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcttcatcggcgcctttttttggaatcagggaagaagatcaaaaccag
cagatgaaacaacagcattcctcaactccaacttcatcttcagctcaggctccaccgcca
cagaagaaaaagagaaaccaacctggaacaccaaatccagacgcagaggtgatagcacta
tctcccaagaccctaatggcaacaaacaggttcatatgtgaggtatgcaacaaagggttc
caaagggagcaaaatctacagctccacagaagaggacataacctgccttggaagctaaag
cagaagactacaaaagaagtgaagaggaaggtttatctgtgccccgaacccacatgcgtc
caccatgagccttctagagctcttggtgatcttactggaatcaaaaagcactactcaaga
aaacatggtgagaagaaatggaagtgtgagaagtgctcaaaaaaatatgcagtccagtct
gattggaaagcccattctaagacttgtggcactagagaatacagatgtgactgtggcact
ctcttctcaaggcgtgacagctttatcactcacagggcattctgtgatgcgctggctcaa
gaaagtgcaagaaaccctcctaccaacttgaacacaattggaagccatctgtatggaagt
agcaacatgaccttaggcttatctcaagtaggaactcaaatctcctcattacaagaccac
aacaaccagtctactgacgttttacgacttggtggcggtggtgcccggactggacaattc
gatcatcttctcccttcatcaattggttcatcgtcgtttcgacctccacagcaaatgccc
tcacctgctttcttcatgcaagaaccaaaccagaattatcatgatgaaaaccaatctcag
caagacttgttgcaaaataagccgttccatcatggactgatgcaatttgctgatattcac
aacaccacaggcaaccctccctctgctggcaatctgttcaacctcagctttctttccaat
agtagcaccgcaagcagcatttccaacggcaacaatgcaaacaattccaacagcaaccta
ccaacttcaggattgctaatgcccagtactcatttcaacaaccaaaatggtgctggtggt
ggtgaagggagtaatatcttctcaaataatgtaatgggtaatcaaatgacctccggtgtc
ccttctctctacagctcttcggttcagaatgataacatggtctctcatatgtctgctact
gctctgcttcaaaaggctgctcaaatgggttcaagctcaagcaacaacagtgcttcatta
cttagaagttttggtagctcttcctcaagtggtaacaaatcagataggccgcttgttggt
gggaactttagtggcatgttcagcgaaaacgagaataatcttcatgacctaatgaactca
tttgctcctgggaattcctccatgtttggttccggacatgcacaagaaaacccctatggt
ggatatactgcaagcaggacaagtttggagcaagaaaagcagcaccacggcccaaatttt
ggcaacactaatatggatgaagcaaagttgcaccaaagtctcaatgcaagcattggtggg
tctgatagattgacaagagactttcttggtgttggtcctcaaatagtgagaagcatgagt
ggatcatcagggttttcacagagagaaaaacagcagcagccacagcgtcagcatcatggc
atggatatgggtggctcctccttggattcagagagacataacgcgaatatttctgcggcg
ccgacaagccaatctttcggaggaaatgggagttttcagtga
DBGET
integrated database retrieval system
