Populus nigra (Lombardy poplar): 133697639
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Entry
133697639 CDS
T10372
Name
(RefSeq) ABC transporter B family member 4-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133697639
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133697639
04147 Exosome [BR:
pnz04147
]
133697639
04090 CD molecules [BR:
pnz04090
]
133697639
Enzymes [BR:
pnz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133697639
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133697639
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133697639
CD molecules [BR:
pnz04090
]
Proteins
133697639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
AAA_21
Zeta_toxin
AAA_30
AAA_15
DUF815
AAA_24
nSTAND1
AAA_7
DEAD
DLIC
Motif
Other DBs
NCBI-GeneID:
133697639
NCBI-ProteinID:
XP_061976321
LinkDB
All DBs
Position
6:complement(22378868..22385977)
Genome browser
AA seq
1302 aa
AA seq
DB search
MADENGLQGDRKLEQAGATTSHSEIVESEIQAVEKNDNQQESEKSKDKKESTNVVPYYKL
FSFADPTDYLLMFVGTIAAIGNGTCMPIMTILFGQVVNAFGSTSTNIEEVTHEVSQVALK
FVYLGLGAMVAAFLQVSCWMVTGERQAARIRNLYLGAILRQEIGFFDNETHTGEIIGRMS
GDTILIQDAMGEKVGKFLQLFTTFTAGFVIAFIKGWKLTLVMASSIPLLVLSGAVMAITV
SKMASRGQTAYSHAANIVDQSIGSIRTVVSFTGEKQAVVQYNKSLTEAVKTGVQEGLAIG
VGFGVVALIVFSTYALAVWFGAKMILNDGYNGGDVVNVNFAVLTGSMSLGQSSSCLSAFS
AGRAAAFKLFEVIDRKSQIDSYNSNGRTLDDIQGDIELKDIHFSYPARPDEQIFNGFSLA
IPPGTTAALVGKSGSGKSTIIGLIERFYDPHAGEVLIDGVNLKEFQLKWIRQKIGLVSQE
PVLFACSIKDNIAYGKDGATSEEIKTAAELANAAKFIDKLPQGLDTMVGENGTQLSGGQK
QRIAIARAILKDPRILLLDEATSALDTESERIVQDALDRIMINRTTVVVAHRLSTVRNAD
AIAVLHHGKIVEKGSHKELTKDPEGAYYQLIRLQEMRTAKNNDVLNNPDGPESLADSDRH
LSKRSSFRRSISRGSSLGHSSRHSFSAAFGVPTGIDLPDTATAEPYILDSEPSEPLPEVP
LFRLAYLNKPEIPVLVLAALAAIVAGAILPVFGILVSSMIKTFFEPPNKLKKDSAFWALM
FVGIGAISLFIQPVKHSLFAVAGCKLIKRIRSMCFEKVIYMEVGWFDQPEHSSGAIGARL
SADAAMVKGLVGDALGMLVQNLGTAVVALFIAFQACWQLAFIMLALLPLLGVNGFIQQKF
MKGFSADAKKMYEEASQVANDAVRNIRTVASFCSEAKVTGLYQQACKGPLKTGMRQGLVS
GIGFGLSFFLLYAVYAACFYAGSRLVNAGVTTFSEVFRVFFALTMASFGISQTSSLGPDI
MKAKSAAASVFAILDRNSKIDSTDDSGTAIENFKGDIEFQHVSFIYPTRPDVQIFRDLCL
KIRSGKTVALVGESGSGKSTVISLLQRFYDPDSGYITLDGVEIQKLQIKWLRQQMGLVSQ
EPLLFNDTIRANIAYGKEGIATEAEILAASELANAHKFISSLQQGYDTVVGDRGIQLSGG
QKQRVAIARAIIKAPKILLLDEATSALDAESERVVQDALEKVMVNRTTVIVAHRLSTIKN
ADVIAVVKNGVIAEKGKHDTLMNIKDGVYASLVSLHTSASSS
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaaaatggtttgcaaggagatagaaagcttgagcaggctggagcaacaacg
agccattcagaaattgtggagtcagagatccaagccgtagaaaagaatgacaaccaacaa
gaatcagaaaagagcaaggacaaaaaggaaagcactaatgtagtgccatattacaagctt
ttctcctttgctgaccccacagattatctattaatgtttgtcggcaccattgctgcaatt
ggaaatggaacctgcatgcccatcatgacgatactatttgggcaagtagtaaatgcattt
ggaagtactagtacgaacattgaagaagtgactcatgaagtttcccaggtagctctgaag
tttgtttacttgggactgggtgccatggttgcagcattccttcaggtatcttgttggatg
gtcaccggggagaggcaggctgcgcgaataagaaatttgtacttgggagccattctcagg
caagaaatcggctttttcgataacgaaactcacacaggagaaattattgggaggatgtcg
ggtgacactattctaattcaagatgccatgggtgagaaggtgggaaagttcttgcagcta
tttacaacattcactgcaggttttgtcatagcctttattaagggatggaaacttactctt
gtcatggcatcttccattccccttctcgtcctatctggtgccgtcatggccattactgtg
tcaaagatggcatcccgtgggcaaactgcttattcacatgcagcaaatatcgtggaccag
tcaattggttccatcagaacggttgtatcatttacaggggagaagcaagctgtggttcaa
tacaacaagtctttgaccgaagctgtcaaaactggggtgcaagagggcttggctatagga
gtcggttttggtgtggttgcacttattgtattctccacttacgctttggctgtatggttt
ggtgctaaaatgattctgaatgatggatataatggaggagatgttgtaaatgtaaatttt
gcagtgttgaccggctccatgtctctaggacagtcatcttcttgcttaagtgcattttct
gctgggagagctgcagcgtttaagttgttcgaggtaattgatagaaagtcacaaatagat
tcttacaacagcaacggacggacactagatgatattcagggagatatagaactgaaggat
attcatttcagttatccagcaagacccgatgagcaaatattcaatggcttctctctcgca
atacctcccggtacaactgcagctttggttggaaagagtggaagtgggaaatctacaatt
attggtttgattgagaggttttacgacccgcacgccggcgaagttctaatagacggcgtt
aacctcaaagagttccagctcaaatggattagacagaaaattggcctggtcagccaagaa
cctgtgttgtttgcttgtagcattaaagataatattgcctatgggaaggatggtgcaact
agtgaagaaatcaaaactgctgctgaacttgccaatgctgccaagttcatagataaactt
cctcagggacttgacacgatggttggggagaatggcactcagctatctggcggccaaaaa
cagagaattgctattgctagagcaattctaaaagatccaagaatactccttctagatgaa
gccacaagtgctcttgatacagaatctgaaagaattgtgcaagacgcattagacaggatt
atgatcaaccgaaccacagttgttgtagctcatcgcttgagtacagtaaggaatgctgat
gcaattgccgttcttcaccatgggaaaattgttgaaaaaggttcccacaaggagctgacc
aaagatcctgagggagcatattatcagcttataagattgcaggaaatgaggacagcaaaa
aacaatgatgttctaaataatccagatgggccagaaagcttagcagattctgatagacat
ttaagtaaacgctcatctttccgacgatcaataagtcgaggctcatcccttggacacagt
agtcgtcactcattctcagctgcatttggtgtgcccactggaattgatcttccagataca
gcaacagcagagccctatattcttgattcagagccatccgaaccacttccagaagtccca
ctttttcgcctagcctatcttaacaaaccagagatcccagtgttagtgctagctgcattg
gctgcaatagtggctggtgcaatattacctgttttcggaatactggtctcttctatgatc
aaaacattttttgagccaccaaataaactcaaaaaggattcagcattttgggcattaatg
ttcgttggtatcggcgcgatatctttatttattcagcccgtaaagcactctctttttgca
gtggctggttgtaaattgataaaaaggattcgatcaatgtgctttgagaaagtgatttat
atggaagtaggctggtttgatcaacctgaacattcaagtggtgcaattggtgcaagactt
tccgcagatgcagctatggtgaaaggtctggttggagacgcacttggtatgctagttcaa
aatcttggaactgcagttgttgctttgtttatcgcctttcaagcatgttggcaactggct
ttcatcatgcttgccttgctacctcttctaggagttaatggatttattcaacaaaaattc
atgaaaggtttcagcgcagatgcaaagaaaatgtatgaggaagcaagtcaagttgcaaat
gatgcagtacggaacattagaacggttgcatctttctgttcggaagcgaaagtgaccgga
ctttaccaacaggcttgtaaaggtcccttgaagacaggtatgaggcaagggttggtaagt
gggataggatttggactatctttcttcttgctctacgcagtctatgctgcctgtttctat
gctggatcccgtcttgtcaatgctggcgtcacaacattttctgaggtttttcgcgtattt
tttgctctcactatggcatcatttgggatttctcaaacaagttccctcggtcctgatatc
atgaaagcaaagtctgctgcagcttctgtatttgcaattcttgaccgaaactcaaaaata
gactctactgatgattctgggacagcaatagaaaattttaaaggagatattgagtttcaa
catgtcagtttcatataccccacaagacctgatgtccaaattttcagagatctatgctta
aaaattcgttctggcaagacagttgctctagttggagaaagtggcagtgggaaatcaaca
gtgatctcattgctgcagagattttatgatcctgattcaggttacataacattagacgga
gttgaaatccagaagctacaaatcaagtggttaagacagcaaatgggcctagtcagccag
gagcctttgttatttaacgacactatccgagccaacattgcatatggaaaggaaggaatc
gcaacggaggcagagattttagctgcgtcagaattggcaaatgcccacaagttcatcagt
agcttacaacagggttacgacacagttgtaggtgaccgaggcatccaattatcaggtgga
cagaagcaacgagtggcaatagcacgtgcgatcataaaggctccgaaaatattactgcta
gatgaagcaaccagtgctctggatgcagaatctgaacgagtagttcaagatgcattggaa
aaagttatggtgaatagaaccactgtgatagtggcccatcggttatccacgatcaagaat
gctgatgttatagcagtggttaagaatggtgtgattgcagagaagggaaagcatgacact
ttgatgaatatcaaggatggtgtctacgcttccttggtatcattacatacaagtgcttca
tcgtcctga
DBGET
integrated database retrieval system
