Populus nigra (Lombardy poplar): 133697685
Help
Entry
133697685 CDS
T10372
Name
(RefSeq) splicing factor U2af large subunit B
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
Spliceosome [BR:
pnz03041
]
Complex A
U2 snRNP components
U2 related factors
133697685
Complex B
133697685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133697685
NCBI-ProteinID:
XP_061976394
LinkDB
All DBs
Position
6:complement(12871446..12880368)
Genome browser
AA seq
919 aa
AA seq
DB search
MMSRSSRHKDKYGRSSEMSQDHQYEGTAARTRPFSFDEIMSIRKNKKASEILEGELKDIL
GGVINEKASDHRSERGNGHNEESSTGLRQHLSEEHGKASYRKKEDNVSMKEDYIAKGRDR
DVRDSETKSKAKMNEDMRTEVKEKTNEKIHDRRKGDKRPSNISESEAVKKHSREVQKDRH
VDKSRGKSERERKEKYRNGIDDKSRDRNAAKKHDLGKGHHLETSERKERKESSKSHHEEL
RLKRRRSRSREHEDRNRRSISLSPRAHKRGSYHKREHVELSSHSVKERSGRQQSDAENNQ
LTNSSSSRHQRRHGGFASGLGGYSPRKRKTEAAVKTPSPAKRSPEKKSAKWDLAPEETNN
VFPAVILSNFQSPNQTASSNIHEVVSAVPVVSAPMKPLSGVSLSSLSTATKVATESIQLT
QATHPTRRLYMENIPASASEKAVMDCLNNFLISSGVHHIQGTQPCISCIRQKEKGQALVE
FLTPEDASAALSFDGRSFSGSIIKVRRPKDFIEVATGELEKSAAAIDAIGDIVKDSPHKI
FIGGISKVLSSKMLMEIASAFGPLKAYQFENSKDPDEPFAFLEYADESVTFKACAGLNGM
KLGGQVITAIQAVPNASSLGSDGNSQFGQISQHAKALLEKPTEVLKLKNVFDSESLSSLS
NTEVEEVLEDVRLECARFGSVKSVNVVKYAAITISTSKSCEFNDDTVSAEATQSLGCDGT
NPKTRNIRGSIDQKFMEGNSIGDDKPASDVMEDEPCQPGQVDSDMAVQDLACKSSSDSQE
PPQDVSDSNVDKVTDDIEIEEVDVENQSTAGEDLNLKEVGDNKLMAGEELNLEEVSGDVE
KAFVNDSMEVKPNSIEKGDCKEQDCNLGLIFERGCVFVEFRRTEAACMAAHCLHGRLFDD
RAVVVEYVPLDIFLARFPK
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcagatccagtcggcataaagacaagtatggaagaagtagtgagatgtctcaa
gatcaccagtatgaaggaactgctgcacggactagaccgttcagctttgatgagattatg
tctataaggaaaaacaagaaagcatctgaaattttggaaggagaattaaaagatatatta
ggaggtgttattaatgagaaagcttctgatcatagatctgaaaggggtaatggccacaat
gaagaatcttcaactggtctccgacagcacttgtcagaggaacatggcaaggcgagttac
agaaaaaaagaagataatgtttccatgaaggaggattatatagccaaaggcagagataga
gatgttcgagattcagaaacaaaatcaaaggccaaaatgaatgaagatatgagaactgaa
gttaaagaaaagactaatgaaaaaattcatgacaggagaaaaggtgataagcggccaagc
aatatttctgaaagcgaagctgtgaagaagcattcaagagaggtgcagaaagatagacat
gtggacaaaagtagaggaaaatctgaaagagaaagaaaggaaaaatacaggaatggtatt
gacgataaaagtagagacaggaatgctgcaaagaaacatgatttaggaaaagggcatcat
ttagaaacttctgagagaaaggaaaggaaggaatcttcaaaatctcatcatgaagaatta
aggctgaaaaggagacgatcaaggagccgagagcacgaggacagaaatagaaggtctatt
tcactctcaccaagggctcacaaacgtggttcttatcacaaaagagaacatgtggaattg
tcctcgcattctgtcaaagaaaggtctggacgacaacaatctgatgctgaaaataaccaa
cttacaaacagtagttctagtaggcatcagaggagacatggtggctttgcaagtgggctt
ggtggctattcaccaaggaagagaaaaactgaggccgctgttaagactccttccccagct
aaacgctcaccagagaagaaaagtgctaaatgggaccttgcaccagaagaaacaaacaat
gtctttcctgctgtgattctctctaattttcaatcaccaaaccaaactgcttcttcaaat
atacatgaagtggtcagtgctgttcctgttgtttcagctccaatgaagcctctttccggg
gtttcactcagttctttgtcaaccgctacgaaagttgccactgaatccattcaacttaca
caagcgacccatcctacaaggaggctttatatggagaacattccagcttcagcctctgag
aaagctgtgatggactgtcttaataactttttgatttcttcaggcgtccatcatatccaa
ggaacccaaccatgtataagctgcattaggcaaaaagaaaagggccaagctcttgtggaa
tttctgactccagaggatgcttcagcagctctctcttttgatggccgttccttctcaggc
tccattatcaaagtcagacggcccaaagactttattgaagtggcaactggtgaactagaa
aaatcagcagctgcaattgatgcaattggtgatattgttaaggattcacctcacaagatt
ttcattggtggaatttcaaaggttctttcttctaaaatgctcatggagattgctagtgcc
tttggacctctgaaggcataccagtttgagaatagtaaggatcctgatgagccatttgcc
ttcctagagtatgcagatgaatcggttactttcaaggcttgtgcgggtctcaatggtatg
aagttaggagggcaagtaataactgccattcaagctgttccaaatgcatcctccttggga
agtgatggaaattcacaatttggccagatctctcagcatgcaaaggcacttcttgagaag
cctacagaagtcttaaagcttaaaaatgtgtttgattcagaaagcctttcatccctatct
aacacggaagttgaagaagtattggaagatgtgcgtttagagtgtgccaggtttggctct
gttaaatccgttaatgttgtcaagtatgctgcaattaccatatccacttcaaaatcatgc
gaattcaatgatgatacggtatctgctgaagctacacaaagcttaggttgtgatggaaca
aatcctaaaacaaggaacatcagaggatctattgaccaaaagtttatggaaggcaacagc
attggtgatgataaaccagcaagtgatgtcatggaggatgagccatgccaaccaggtcag
gttgacagtgatatggctgttcaagacttagcatgcaagagttcatctgattctcaagaa
ccccctcaagatgtgtcagacagcaatgttgacaaggtcactgatgacattgaaattgag
gaagtcgatgtggaaaaccaatcaacagctggagaagatttgaatttgaaggaggtggga
gataacaaattaatggctggagaagagttgaatctggaggaagtcagtggagatgttgaa
aaggcttttgtgaatgatagcatggaagtgaaaccaaattctattgagaagggagattgc
aaggaacaggattgtaatcttggactcatttttgagcggggatgtgtttttgtggagttt
agaagaacggaagccgcatgcatggcagcgcattgtttacatggaaggttatttgatgac
cgtgctgtggtggtggaatatgttcctcttgatattttccttgccagatttccaaaatga
DBGET
integrated database retrieval system
