Populus nigra (Lombardy poplar): 133697712
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Entry
133697712 CDS
T10372
Name
(RefSeq) probable pectate lyase 13 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00040
Pentose and glucuronate interconversions
pnz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133697712
Enzymes [BR:
pnz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
133697712
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
133697712
NCBI-ProteinID:
XP_061976439
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Position
6:1529135..1534382
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AA seq
496 aa
AA seq
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MKLPSIYILLICLFTSFTRFIIETTAFNLTLPHQHPDPEAVAEDVKRRVNASLSRRHLLS
IQEKDQCQTGNPIDDCWKCNSNWANNRQRLADCAIGFGQGSLGGRGGQIYVVTDSSDYDP
ANPKPGTLRYGVIQDQPLWIIFSSNMVIKLKHELIFNSYKTIDGRGANVHITGNGCITLQ
YVSHIIIHNIHVHHCKPSGNTNIAASPTHVGWRGRSDGDGISIFGAQKIWIDHCSLSYCT
DGLIDAIMGSTGITISNNHFTHHDEVMLLGHDDKYALDTGMQVTIAFNHFGQGLVQRMPR
CRRGYIHVVNNDFTAWEMYAIGGSANPTINSQGNRYTAPTDDNAKEVTKRVDTNEGDWAD
WNWRTDGDIMVNGAFFVPSGAGLSAQYSKASSVEPKSAGLIQQLTLNAGVFGDPRDDSGG
ISTPGFSGGGTSSTTNTGVQGSGSSGGDGDYFGMIFGSGAPPPASTSLIFLSLLIILILC
TITNHVALESFPLLSL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcccagtatctacattctcttaatttgcctctttacttctttcactcgattc
attattgaaactactgccttcaatctcacccttccacaccagcatccagaccccgaggca
gtagctgaagatgtaaaacggagagtcaatgcatctctatcaagaaggcaccttttgtcc
attcaagagaaggaccaatgccaaactggaaaccccatcgatgattgctggaaatgcaac
tctaattgggctaacaaccgccaacgtttagctgactgcgccattggatttggtcaaggc
tcgttaggtggaagaggtggtcagatctatgtagtcactgactcctctgactatgatcca
gccaacccaaaaccaggcacattacgttacggtgtcatccaagaccaacccctgtggatc
atcttctcttcaaatatggtcattaagctcaaacatgagcttattttcaatagttacaaa
actattgatggccgtggcgcaaatgttcacattacaggaaatgggtgcataacacttcaa
tacgtatcacacattattatccacaacatccacgttcaccactgcaagccttctggaaat
actaacatagcagcatcaccaacacatgttggatggagagggagatcagacggtgatggc
atttccatttttggggcccagaagatttggatcgatcactgttctttatcttattgcact
gatggtttgattgatgctataatggggtccactgggattaccatatcaaacaaccatttt
acccaccatgatgaagtgatgctattggggcatgatgataagtatgcattggacacaggt
atgcaagttaccatagcctttaatcactttggccaagggcttgtccaacgtatgccaagg
tgtagaagagggtatatacatgtggtgaacaatgattttacagcctgggagatgtatgct
attggtggtagtgcgaatcctaccataaatagtcaagggaatcgatataccgcaccaact
gatgataatgccaaagaggtaacaaagagggtggacacaaacgagggagactgggcagat
tggaattggagaacagatggggacataatggtaaacggagcgttctttgtgccctcagga
gccggtctgagtgcacagtatagtaaagcctccagtgtggaacccaagtctgctggttta
attcaacaactcaccttgaatgctggtgtcttcggtgaccctagagatgacagtgggggc
atttctactccgggattcagcggaggtgggactagctccacaaccaacaccggcgtccag
gggtccgggtccagcggtggtgatggcgattacttcggaatgatattcgggagcggtgct
ccaccacccgcatctaccagcttaatctttttgtcccttctaattattttaattctgtgc
accatcaccaaccatgttgccttggaatctttcccattattatcattatag
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