Populus nigra (Lombardy poplar): 133697956
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Entry
133697956 CDS
T10372
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133697956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133697956
04147 Exosome [BR:
pnz04147
]
133697956
04090 CD molecules [BR:
pnz04090
]
133697956
Enzymes [BR:
pnz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133697956
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133697956
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133697956
CD molecules [BR:
pnz04090
]
Proteins
133697956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
Zeta_toxin
AAA_16
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
133697956
NCBI-ProteinID:
XP_061976784
LinkDB
All DBs
Position
6:2800006..2808264
Genome browser
AA seq
1397 aa
AA seq
DB search
MMIPRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDASAEAAAAAAQAEAEEEIDEAEEM
EPPPAAVPFSRLFACADRLDWGLMIVGSLAAAAHGTALVVYLHFFGKIIGVLEILPGERF
DRFTHLAMHIVYLAVGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGN
NGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFVNCWQIALITLATGPFIVA
AGGISNIFLHRLAESIQDAYAEAASIAEQALSYTRTLYAFTNETLAKYSYATSLQATLRY
GILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTDRKAHGGEIVTALFAVILSGLGLNQ
AATNFYSFDQGRIAAYRLFEMISRSSSTVNQDGDSLVAVQGNIEFRNVYFSYLSRPEIPI
LSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQ
VGLVTQEPALLSLSIIDNISYGRDATMDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLA
LTEEQKIKLSIARAVLLNPTILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLS
LIKNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLKCEEAAKLPRRMPVRNYTETAAFQ
VEKDSSTGHSYQEPSSPKMAKSPSLQRVPGIFRPPDSMFNSQESPKVLSPPPEKMIENGL
PLDGADKEPSIRRQDSFEMRLPELPKIDVQSAHRHTSNGSGPESPVSPLLTSDPKNERSH
SQTFSRPHSHSDDVPIKVKEARDVKHQKEPPFWRLAELSLAEWLYAVLGSIGAAIFGSFN
PLLAYVISLIVTAYYRREHHWRQDVDRWCLMIAIMGIVTVVANFLQHFYFGIMGEKMTER
VRRMMFSAMLRNEVGWFDEEDNSADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAV
VIGMLLQWRLALVALATLPVLTVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTV
VAFCAGNKVMELYRLQLKKIFKQSFVHGMAIGFGFGFSQFLLFACNALLLWYTAYSEKNL
HVDLHTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDREPKIDPDDNSALK
PPNVYGSIELKNVDFCYPTRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFY
DPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIKENIIYARHNASEAEMKEAA
RIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESE
SSRVVQEALDTLVMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEDGTHNSLMAKNGLYV
RLMQPHFGKGLRQHRLI
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgatgatccccaggggattattcggatggtccccacctcatatacagccattgacgccg
gtatcggaggtttccgagccgccggagagtccttctccgtacttagatgccagcgcggag
gcggccgcggctgccgctcaggcggaagcggaggaggagatcgacgaggctgaggagatg
gagccgccgccagctgctgttccgttctcgaggttgtttgcttgtgctgataggttagat
tgggggctcatgatcgttggttcgcttgcagctgctgcgcatgggactgctcttgttgtt
tacttgcatttctttgggaagattattggggttttggagattctgccgggggagcgattt
gacaggtttactcatcttgccatgcacattgtatacttagctgtgggtgtttttgctgct
ggttggattgaggtttcctgctggattctaactggggaacgacagactgcggtcatcagg
tcgaagtatgttcaagtattactcaatcaggacatgagcttttttgacacctatgggaat
aacggggatattgttagccaagtattgagtgatgtgctcctcattcaatctgctttgagt
gaaaaggttggaaattatattcataacatggctacgttttttagtggtcttgttattgga
tttgtcaactgctggcagattgcactcataactttagccactggcccattcattgttgct
gcaggaggtatctcaaatatatttcttcataggcttgctgagagcattcaagatgcatat
gctgaagcagctagcattgctgaacaggcactctcttacactaggaccttatatgcattc
acaaatgaaactctggccaaatattcatatgcaacgtcactacaagcaactttgagatat
ggtattttaattagccttgttcaaggacttgggcttggttttacatatggacttgcaata
tgttcttgtgccttgcaactttgggttggaaggtttctggttacagatcgtaaagctcat
ggtggtgaaatagtgacagccctttttgctgtaattttaagtggccttgggctgaatcaa
gctgcaaccaatttctattcatttgatcaaggacggatcgctgcttatagactttttgag
atgataagtagatcatcttccacagttaatcaggatggagacagcctagtggcagtgcaa
ggaaatatcgagtttcggaatgtttattttagctatctatctcgtcctgagatccccatc
ttgagtggattttacctcactgtaccagctaaaaaagcagtggctcttgttggcagaaat
ggttctggaaaaagcagcattatcccactcatggagcgcttttatgatcctaccttagga
gaagttcttcttgatggagagaacataaaaaacctgaaactggaatggctcagaagccaa
gtaggactggtcacccaggaacctgccttgttaagtttgagtataattgataacatttca
tatggacgagatgctactatggatcagattgaagaagctgccaaaatagcacatgcacat
acatttatcagttcacttgagaaaggctacgagacacaggtgggtagggctggtttagca
ttgacagaggagcagaaaattaaactttctatcgccagagcagtgcttttgaatccaaca
attcttctgcttgatgaggttactggtggacttgattttgaagctgagagagcagttcaa
gaggcactagatcttctcatgttgggacgttcaaccattataatagctagacgtcttagt
ctaatcaagaatgctgattatatagctgtaatggaggagggccagcttgttgaaatgggt
acacatgacgaactattaaccttggatggtctgtatgcagagcttctcaaatgtgaagaa
gcagcaaaacttccaaggaggatgccagttagaaactacacagagactgctgctttccaa
gttgaaaaggattcttctaccggccatagctatcaagaaccatcctctcctaaaatggca
aagtcaccatcgcttcagagggtccctggtatatttcggcctccagatagcatgtttaat
tcgcaagaatcaccaaaagttctcagcccaccaccagagaagatgatagaaaatggtctt
cccttggatggtgctgataaggaaccatcaataagaaggcaggatagttttgaaatgaga
ctccctgagttacccaagattgatgtccagtctgcacatcgacatacatcaaatggttca
ggccctgaatcccctgtttctccacttttgacatctgatcctaaaaatgagcgttcccac
tcacagacttttagtcgaccccacagtcactctgatgatgttccaattaaagtgaaggaa
gcaagggatgtaaaacatcagaaagaaccaccattttggagactagcagagcttagtctt
gcagagtggctttatgctgtgttaggaagcattggtgctgctatttttggttctttcaat
ccacttcttgcttatgttatttcactgatagtgactgcttattatagacgagaacaccac
tggcgacaggatgtagacaggtggtgcttgatgattgccatcatgggtatagtgactgtt
gttgccaatttcttgcagcacttctattttggcatcatgggagagaaaatgactgaacga
gtccgcagaatgatgttttcagcaatgctacggaatgaagttggatggtttgatgaagag
gataatagtgctgacacattatccatgcgcttggcaaatgatgctacttttgtacgagct
gcattcagcaatcgactttcaatatttatacaggacagtgccgcagttattgtggctgtt
gtcattgggatgctgcttcagtggcgattggctcttgtggcattggcaaccctgccagtt
ctcactgtctctgcaatcgcacagaagttgtggcttgctggattttctaggggcatccag
gagatgcacagaaaggcatcactggtccttgaggatgctgttagaaacatttatactgtc
gtggcattctgtgctggtaacaaagtaatggagctctacagattgcaactgaagaaaata
tttaagcagagttttgtccatggaatggccattggttttggatttggtttttcacagttt
cttctttttgcctgtaatgcccttcttctctggtacactgcatactctgaaaagaatctc
catgttgatcttcatacagctctcaaggagtatatggttttctcttttgcaacatttgca
ctggtggaaccttttggattggctccatacatacttaagcggcgaaaatctcttatttca
gtatttgaaattatagatcgagaacctaagattgacccagatgataactcagcactgaag
cctccaaatgtttatggaagcatcgagttgaagaatgtggatttctgctatccaactcgc
ccagaagtgttggtattgagcaatttcagtctcaaagttaatggaggacaaactgtagct
gtggtgggagtttcagggtctggaaaaagcactataatttctttaattgagagattttat
gatccagttgctggtcaggtcctgctggatggtcgggatttaaaactttataatttgaga
tggttgaggaaccatctaggtcttgttcagcaggaaccaattatcttttcaacaactata
aaagaaaatattatatatgccaggcacaatgccagcgaagctgagatgaaagaggctgct
agaattgctaatgctcaccatttcatcagtagcctgcctcatggttatgacacccatgtg
ggaatgaggggcgtggaccttaccccaggacagaagcagagaattgcaattgctcgagta
gtgctcaagaatgcacccatcttgttattggatgaagccagctcatccattgaatctgaa
tcaagtcgtgtggtacaagaggcactagatactctggttatgggaaacaaaactaccatt
ctgatagctcatagagcggcaatgatgaggcatgttgataacattgtggttctaaatgga
gggcgaattgttgaggatgggacccataattctttgatggcaaagaatggtttgtatgtc
agattgatgcagccccattttggaaagggtttgcgtcaacatcgactaatttaa
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