KEGG   Populus nigra (Lombardy poplar): 133698026
Entry
133698026         CDS       T10372                                 
Name
(RefSeq) serine hydroxymethyltransferase 1, mitochondrial-like
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz00260  Glycine, serine and threonine metabolism
pnz00460  Cyanoamino acid metabolism
pnz00630  Glyoxylate and dicarboxylate metabolism
pnz00670  One carbon pool by folate
pnz01100  Metabolic pathways
pnz01110  Biosynthesis of secondary metabolites
pnz01200  Carbon metabolism
pnz01230  Biosynthesis of amino acids
pnz01240  Biosynthesis of cofactors
pnz04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    133698026
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    133698026
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    133698026
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    133698026
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    133698026
Enzymes [BR:pnz01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     133698026
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 133698026
NCBI-ProteinID: XP_061976869
LinkDB
Position
6:84421..91879
AA seq 520 aa
MAVAMTMALRRLSSSFDKPLRPGLFKATSLYYMSSLPNEAVYEKEKPGVSWPKQLNAPLE
AVDPQVADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNE
YIDMAESLCQKRALEAFRLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGG
HLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYAR
LYDYARIRKVCDKQKATLLADMAHISGLVAADVIPSPFEYADIVTTTTHKSLRGPRGAMI
FFRKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTVEYKAYQ
AQVLSNCAKFAQSLVEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNT
VPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVKLAVKIKAETKGTKLKDFL
ATQSAPHFQSEISKLRRDVEEYAKQFPTIGFEKETMKYKN
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggcagtggcaatgaccatggcccttcgccgtctctcctcttcctttgacaagcccctt
cgccctggtctcttcaaagccacctccctctattacatgtcttctttgccaaacgaagct
gtatatgagaaggagaaacctggtgtcagctggccaaagcagctgaatgcacccttagag
gctgttgaccctcaggttgctgatattattgagctcgagaaagctaggcaatggaagggg
cttgagcttataccctcagagaacttcacttcggtatcagtgatgcaagctgtgggttct
gtcatgaccaacaagtacagtgaaggataccctggtgcaagatactatggtggaaacgag
tatattgacatggcagaatccttatgtcagaagcgtgctctggaagcatttcgcctggat
cctgctaaatggggagtgaacgtgcaatctctatctggatctccagctaattttcaagtc
tacactgcattgttaaagcctcatgaaagaatcatggcacttgatcttcctcatggaggc
catctttctcatggctatcagacagacaccaaaaaaatatctgcagtatcaatatttttt
gagacaatgccatacagattgaatgagagcactggctatattgactatgatcagctggag
aaaagtgccactcttttcagaccaaaattaatagtagctggtgctagtgcttacgcacga
ctatatgattatgcacgcattcgcaaggtttgcgacaaacaaaaagctacactgttggca
gatatggcacacattagtggattggttgcagctgatgtcatcccgtcaccttttgagtat
gcagatatagtgactaccacaactcacaagtcacttcgcgggccacgtggggcaatgatt
ttcttcaggaaggggttaaaagaggttaacaaacaagggaaagaagtgttttatgactac
gaggacaaaatcaatcaagctgtctttcctgggcttcaaggtggtccacacaaccacaca
attgctggtttagcagttgctttgaaacaggctacaactgtagagtacaaagcgtatcaa
gcgcaagttctaagtaattgtgcaaaatttgcccagagtttagttgagaaaggctacgaa
cttgtttctggaggaactgagaaccatttagttttggtgaatttgaagaacaagggtata
gatggctccagagttgaaaaggtgcttgaatctgttcacattgctgcaaacaaaaacact
gttcctggagatgtgtctgccatggttcccggtggcatcaggatgggaacgccggctctt
acttctaggggattcgttgaagaggattttgctaaggtggcagatttctttgatgccgct
gtgaagttggcagtgaagatcaaggctgaaaccaaagggacgaagttgaaggatttcttg
gcaacgcagtctgctcctcactttcaatctgagatttcaaaactccgtcgtgacgtggaa
gagtacgctaagcaattcccaacaattggatttgaaaaggaaaccatgaagtacaagaat
tga

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