Populus nigra (Lombardy poplar): 133698033
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Entry
133698033 CDS
T10372
Name
(RefSeq) SEC12-like protein 2 isoform X1
KO
K14003
prolactin regulatory element-binding protein
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133698033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133698033
Membrane trafficking [BR:
pnz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
133698033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_2nd
WD40_Prp19
WDR55
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
Tricorn_2nd
Beta-prop_WDR19_1st
Beta-prop_Aladin
PEP5_VPS11_N
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
RMC1_N
WD40_Gbeta
CFAP43_N
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
133698033
NCBI-ProteinID:
XP_061976885
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Position
6:complement(9518680..9524967)
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AA seq
404 aa
AA seq
DB search
MGKSREAHPQSLQKYGVPLYSAAWLPYKELRSKLQPRDDHIDSSKQQEQQQEEEIPKPSA
SSHEHYIVLAGGGGEGSSGIPNAVLLSCFDFSSNSLSSQPVAKLDLGSQLPYRMVVHPGG
DGVICAFPSSCRFFDWDEVKDNEDHKLGLKPSKKVLTQLEDVGQQLALAFNSDSSVLAVG
GEDGNLRVFKWPGMEIILNETQAHASLKDLCFSPDGKFLVSMGQRDLGRVWDVTSSTAVA
SLPKENDEIFASCRFSQRSDQAQVLYIAAITDKGSSIVTWNTSSWKRMSSKHVAREPISS
FNVSPDGKLLAMGMTQGDVLLVNSTNLRVQTLIRKAHLGIVTALAFSHDSRALVSASMDS
SARVTLIEDNKSAAGGSSMQIIIFIIILAIAAYFLKNEVLPFLV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagagcagagaggcacatcctcaaagcctgcaaaaatacggcgttcctttatac
tctgctgcttggcttccttacaaagagctcagatccaagctacaaccccgtgacgatcac
attgattcctctaaacaacaggaacaacagcaggaggaggagatccccaagccctctgct
tcttcccatgaacactacatcgttttggccggcggtggcggtgaaggcagcagcggcatt
cccaacgccgtccttctctcctgttttgatttctcctccaattccctctcttctcagccc
gtagctaagcttgatcttggttctcaattaccctatagaatggtggttcaccccggtgga
gatggagtcatttgtgcattccccagtagttgccgattttttgactgggatgaagtcaag
gacaatgaagaccataaattgggccttaaaccatccaaaaaagtactgacacaattagaa
gatgttggacagcaattagcattggcctttaacagtgacagctctgtacttgctgtaggg
ggcgaggatggcaatttaagggttttcaagtggcctggcatggaaattattcttaatgag
actcaagcccatgcatctttaaaggacttgtgtttcagccctgatggaaaatttcttgtt
tcaatgggacagcgtgaccttggtagagtctgggatgtaacttcatccacagctgtagcc
tctttacccaaggaaaacgatgagatttttgcatcgtgcagattttctcaaaggagtgat
caggctcaggttctctatatcgccgcaataacagacaaaggttcaagtattgtgacttgg
aatacaagctcatggaagagaatgagctcaaagcatgtagcccgtgaaccaatttcatcc
ttcaatgtctcacctgatggaaagcttcttgcaatgggtatgactcaaggagatgtgctg
cttgtaaattcaaccaacttgcgtgttcaaacactaattaggaaagcacatcttggcata
gtaactgcattggcgttctctcatgattcaagggctttggtctctgcctctatggactca
agtgcaagggtgacactaattgaggacaacaaaagtgctgcagggggatcaagcatgcag
atcattatattcatcattatacttgcaattgctgcatatttcttgaagaatgaagttctt
ccttttcttgtctag
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