KEGG   Populus nigra (Lombardy poplar): 133698033
Entry
133698033         CDS       T10372                                 
Name
(RefSeq) SEC12-like protein 2 isoform X1
  KO
K14003  prolactin regulatory element-binding protein
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133698033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133698033
Membrane trafficking [BR:pnz04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    133698033
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_EML_2 WD40 WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_WDR36-Utp21_2nd WD40_Prp19 WDR55 WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_EML Tricorn_2nd Beta-prop_WDR19_1st Beta-prop_Aladin PEP5_VPS11_N Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 RMC1_N WD40_Gbeta CFAP43_N Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 133698033
NCBI-ProteinID: XP_061976885
LinkDB
Position
6:complement(9518680..9524967)
AA seq 404 aa
MGKSREAHPQSLQKYGVPLYSAAWLPYKELRSKLQPRDDHIDSSKQQEQQQEEEIPKPSA
SSHEHYIVLAGGGGEGSSGIPNAVLLSCFDFSSNSLSSQPVAKLDLGSQLPYRMVVHPGG
DGVICAFPSSCRFFDWDEVKDNEDHKLGLKPSKKVLTQLEDVGQQLALAFNSDSSVLAVG
GEDGNLRVFKWPGMEIILNETQAHASLKDLCFSPDGKFLVSMGQRDLGRVWDVTSSTAVA
SLPKENDEIFASCRFSQRSDQAQVLYIAAITDKGSSIVTWNTSSWKRMSSKHVAREPISS
FNVSPDGKLLAMGMTQGDVLLVNSTNLRVQTLIRKAHLGIVTALAFSHDSRALVSASMDS
SARVTLIEDNKSAAGGSSMQIIIFIIILAIAAYFLKNEVLPFLV
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgggaaagagcagagaggcacatcctcaaagcctgcaaaaatacggcgttcctttatac
tctgctgcttggcttccttacaaagagctcagatccaagctacaaccccgtgacgatcac
attgattcctctaaacaacaggaacaacagcaggaggaggagatccccaagccctctgct
tcttcccatgaacactacatcgttttggccggcggtggcggtgaaggcagcagcggcatt
cccaacgccgtccttctctcctgttttgatttctcctccaattccctctcttctcagccc
gtagctaagcttgatcttggttctcaattaccctatagaatggtggttcaccccggtgga
gatggagtcatttgtgcattccccagtagttgccgattttttgactgggatgaagtcaag
gacaatgaagaccataaattgggccttaaaccatccaaaaaagtactgacacaattagaa
gatgttggacagcaattagcattggcctttaacagtgacagctctgtacttgctgtaggg
ggcgaggatggcaatttaagggttttcaagtggcctggcatggaaattattcttaatgag
actcaagcccatgcatctttaaaggacttgtgtttcagccctgatggaaaatttcttgtt
tcaatgggacagcgtgaccttggtagagtctgggatgtaacttcatccacagctgtagcc
tctttacccaaggaaaacgatgagatttttgcatcgtgcagattttctcaaaggagtgat
caggctcaggttctctatatcgccgcaataacagacaaaggttcaagtattgtgacttgg
aatacaagctcatggaagagaatgagctcaaagcatgtagcccgtgaaccaatttcatcc
ttcaatgtctcacctgatggaaagcttcttgcaatgggtatgactcaaggagatgtgctg
cttgtaaattcaaccaacttgcgtgttcaaacactaattaggaaagcacatcttggcata
gtaactgcattggcgttctctcatgattcaagggctttggtctctgcctctatggactca
agtgcaagggtgacactaattgaggacaacaaaagtgctgcagggggatcaagcatgcag
atcattatattcatcattatacttgcaattgctgcatatttcttgaagaatgaagttctt
ccttttcttgtctag

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