Populus nigra (Lombardy poplar): 133698136
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Entry
133698136 CDS
T10372
Name
(RefSeq) diaminopimelate decarboxylase 2, chloroplastic-like
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00300
Lysine biosynthesis
pnz00470
D-Amino acid metabolism
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
pnz01230
Biosynthesis of amino acids
Module
pnz_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
133698136
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
133698136
Enzymes [BR:
pnz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
133698136
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
133698136
NCBI-ProteinID:
XP_061976949
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All DBs
Position
7:6269988..6274160
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AA seq
488 aa
AA seq
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MATATDLSKSRFISKTLTHSLNQNLFSKKSILPFKLTKKNSLKPLSLKAVISQQNPATTT
AQETTQFKHCFTKSKDGFLCCENLKVQEIMENVEKRPFYLYSKPQITRNVEAYKDALQGL
NSIIGYAIKANNNLKILEHLRGLGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKLLEDL
VLAAQEGVFVNVDSEFDLENIVAAARIAGKKVNVLLRINPDVDPQVHPYVATGNKNSKFG
IRNEKLQWFLDAVKAHCDELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRAQGFEV
DYLNIGGGLGIDYYHSGAVLPTPRDLIDTVRELVLSRGLNLIIEPGRSLIANTCCLVNRV
TGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELVSPASPKAEVSTFDVVGPVCESADF
LGKDRELPTPAKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGTVSKIRHGETFED
HIRFFEGL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgctacagatctctctaagtcacgcttcatttccaaaaccctaactcactcc
ctaaatcaaaacctattttccaaaaaatcaattttgccctttaaactaacaaaaaaaaac
tctctcaaacccctttctctcaaggcagttatttcccaacagaaccccgctacaaccaca
gcacaggaaaccacacagtttaagcattgtttcaccaaatccaaagatgggtttctctgc
tgtgagaaccttaaggttcaggagattatggaaaatgttgagaagagaccgttttatttg
tatagtaagccacagattactagaaatgttgaggcttataaggatgccttacaaggactg
aattctattattggttatgctattaaggctaataataatttgaagattttggagcatttg
agagggttgggttgtggtgctgttttggtaagtggtaacgagcttaggttggctcttcgg
gctggtttcgatcccacaaggtgtatttttaatggaaatgggaagctgctggaggatttg
gttctggctgctcaagaaggtgtttttgttaacgtggatagtgaatttgatttggaaaat
attgtggcagctgctagaatcgctggcaagaaggttaatgttctactccggatcaaccca
gatgttgaccctcaggtccatccttatgttgctacagggaacaagaactctaaatttggt
attagaaatgagaagctgcaatggtttctggatgctgtaaaggcacactgtgatgagctg
aagctcgtgggggcccattgccatctaggatcaaccatcaccaaggtggacatattcagg
gatgctgcagttctcatggttaactacattgacgaaatcagagctcagggctttgaagtt
gattacttaaacattggaggtggtttgggtatagattattatcattctggtgcagtcctt
cctactccaagagatctcattgacactgttcgtgaactggttctctcacgaggtctcaat
ctcatcattgaacctgggagatcgctcattgcaaatacctgctgcttggtgaatagggtc
actggggttaaaactaatggaacaaaaaattttgttgtgatagatggcagcatggctgaa
cttatccgtcctagtctttatgatgcttatcaacacatagagcttgtttctcctgcatca
cccaaggctgaagtttcaacttttgatgtggttggtcctgtctgtgagtcagcagatttc
ctgggaaaggatagagaacttccaactccagctaagggagctggtttggttgttcatgac
gcaggtgcttactgcatgagcatggcatcgacatacaatctcaagatgcgccctcctgag
tactgggttgaagaagatggaacagtgtccaaaattcggcacggggagacattcgaagac
catattcggttctttgagggtctttga
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