Populus nigra (Lombardy poplar): 133698173
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Entry
133698173 CDS
T10372
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133698173
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133698173
PBAF complex
133698173
GBAF(ncBAF) complex
133698173
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133698173
NCBI-ProteinID:
XP_061977005
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Position
7:complement(6695272..6700529)
Genome browser
AA seq
1004 aa
AA seq
DB search
MEEKPAGSFADSPASFEPATSRRRAGGHKRKASLSNSLSSPLPSKRLTREKAGFSNLSFH
NGPLTRARQIPNISTSSAPSAGVKIEQKVVAAVPDAAAVVEEERRSRVEELQAEIEAEFE
VIRSRDSNAHVVPSHCGWFSWTQIHSLEERLLPSFFNGKSQSRTPDTYLDIRNWIMKKFH
ANPNTLIELKDLSELEVSDSEARQEVLEFLDYWGLINFHPLQLDSVTNADGDGAAKKDLS
LEKLFRFEAIQTCPPVVTKSNFTAPTTPSRLFPESAIAEELAKLEGPSVEYHCNSCSADC
SRKRYHCQKEADYDLCADCFNNRKFGSNMSSSDFILMEPAEAAGVSGGKWTDQETLLLLE
ALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDAFFDCANDMDGTSKETADADATIDD
TSAPKDVHDTSDTKTGADEEQHLTVPMEASKPEDTSGVKVCQGGDVINGQETSKSEDVSG
VKAGEEMGENVALRALTEAFEAVGYSPTPENRLSFSEVGNPVMALASFLARLVGPDVATA
SACSALKSLSSNSPGMQLASRHCFLLEDPPDERKKPSCSDCVATEMADQDALKDKQEGKS
QKGNSPTSGIDNKDLSDDYSDKKVEDSIPEEKKPLDSSKGEFPGKVDVVNGEIVVTHEEV
EPGRSKESSSSELPKDHTPGIVKESDEIPPKSGCPPSSGKEPLEVSSAEEHSQLTEVAKD
VDMVSNLKPPEKNGHSQSFASMSVDEPSQAVDVSKDVDMVSDSLPADNNGSQQPVKSNAT
GEQSQTTEATADVDMSSSQPSEVNESSDPKVESGATADEVAKDSKKEKPDSEVIKDDNNI
DKLKRAAVSALSAAAVKAKLLANQEEDQIRELAASLIEKQLHKLETKLAFFNEMDSVIMR
VREQLDRSRQRLYQERAQIIAARLGLPPSSRTMPQSLPSNRIAMNFANTFPRPPMNMATQ
RPPISTPMGTLANTPPGTFVSTTTTAGNSIRPSSQDKMSSIGTK
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaaccggcggggagctttgccgactcgccggcgtcatttgaaccggcaact
tcgaggcgccgggctggagggcacaaaaggaaagcttcactttcaaactctctctcctca
cctctaccatcgaaacggctcactcgcgagaaagctggattttctaatctctcgttccat
aacggtccgttgactagagcgagacaaatccctaacatctcgacttcttcggcgccttca
gcaggcgtgaagatcgaacagaaggtagttgcggcggtgccggatgctgctgcggtggtg
gaggaggagaggaggagtagggtggaggaattgcaagcagaaattgaagcagagtttgag
gttattagatctcgtgattctaatgctcatgttgtgcctagtcattgtggttggttttca
tggacacaaattcactcgcttgaggagcgtttactgccttcattctttaatgggaagtcc
caaagccggacacctgacacctatttagatatacgtaattggattatgaagaagtttcat
gcaaatccaaacactcttattgaattgaaagatttatcagaacttgaagtttcagactca
gaagcgaggcaggaggtgttagagttcttggactattggggattaattaacttccatcca
ttacaattagattctgttacaaacgctgatggtgatggagcagcaaagaaagatttgtca
cttgaaaagttgtttcgctttgaagccattcaaacatgtccacctgttgttactaaatct
aacttcacagctccaactacaccatctagattgtttcctgagtcggcaattgctgaagag
ttggctaagcttgaggggccatctgttgagtaccactgcaattcttgttcagctgattgc
tcgcgcaagcgctatcattgccagaaggaggcagattatgatttatgtgccgattgcttt
aataatagaaagtttggctcaaacatgtcctcatcagattttattctcatggagcctgct
gaggctgctggtgtaagtggtggaaagtggacagatcaagagactctacttcttcttgaa
gcattggaactctataaagaaaactggaatgagattgcagaacatgttgccacaaaaacg
aaggctcagtgtatattgcactttgttcaaatgccaattgaggatgccttttttgactgc
gccaatgatatggatggtacttctaaagaaacagcagatgctgatgcaaccattgatgac
acatctgcccctaaagatgtccatgatacaagtgacactaaaacaggtgctgatgaggaa
caacacctgactgtgccaatggaagcttcaaaaccagaagatacgagtggagtaaaagtt
tgtcaaggaggtgatgtgattaatggtcaggaaacttcaaaatcagaagatgtcagtgga
gtgaaggctggtgaggaaatgggtgaaaatgttgcactcagggctcttacagaagcattt
gaagctgttggctattccccaactcctgaaaaccgactttcattttctgaagttggaaat
cctgtcatggctttggcatcgtttctggcaagattagtgggacctgatgtcgctactgct
tcagcctgcagtgctttgaaatccttgtctagcaattctcctggcatgcagctggcatca
aggcattgctttctcctggaagatccaccagatgagagaaagaaaccatcttgcagtgat
tgtgttgctactgaaatggctgatcaggatgctctaaaggacaagcaggagggaaaaagc
cagaaagggaatagccctacctcaggtatagacaacaaagatttgtcagatgattacagt
gacaagaaagttgaagactccattcctgaagagaagaaacctctggattcttcaaaaggt
gaattcccaggtaaagtagatgttgtaaacggagagatagtggttactcatgaggaagtt
gaacctggtagatcaaaggaatctagcagttcagagttacctaaggaccacacaccaggt
attgtaaaggaatcagatgagataccacccaagtcagggtgtccaccaagctccgggaag
gaaccactggaagtatcttcagctgaagagcattctcagcttacagaggtggctaaggat
gtggatatggtgtctaatttgaagcctccagaaaagaatgggcattctcaatcattcgca
tcaatgtcagttgatgaaccctctcaagctgttgacgtgtcaaaggacgtggacatggtg
tctgattctctgcctgcagacaacaatgggtcacagcaaccagtgaaatcgaatgcaaca
ggagagcagtctcaaactacagaggcaacagctgatgtagacatgtcatcttcacaacct
tcagaagtgaacgagtcctcggatccaaaggttgaaagtggagccactgcagatgaggtt
gcaaaagacagcaagaaagagaagcctgatagtgaagtgattaaagatgacaataacatt
gataaactgaagcgtgctgcagtttcagctctctcagcagcagcagtgaaggcaaaactt
cttgcaaaccaggaagaggaccaaattcgggaacttgctgcctcgttgattgagaagcag
ttacataagttggaaaccaaactggctttctttaatgaaatggatagtgtaataatgagg
gtgagggagcaactggacaggtcaaggcagagactttaccaagaacgagctcagataatt
gcagcccgacttggtttaccaccttcatctagaacaatgccacaatcattaccttccaac
agaattgcaatgaactttgcaaacacatttccgagaccaccaatgaacatggctacccaa
aggccaccaatttcaacaccgatgggtacattggctaatacccctcctggaacatttgtg
tcaacaaccactacagcaggaaattcaattcggccttctagtcaggacaaaatgtcttca
attggaacaaagtag
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integrated database retrieval system
