KEGG   Populus nigra (Lombardy poplar): 133698174
Entry
133698174         CDS       T10372                                 
Name
(RefSeq) ras-related protein Rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04144  Endocytosis
pnz04145  Phagosome
pnz04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133698174
   04145 Phagosome
    133698174
   04148 Efferocytosis
    133698174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133698174
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133698174
   04031 GTP-binding proteins [BR:pnz04031]
    133698174
Membrane trafficking [BR:pnz04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    133698174
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133698174
  Exosomal proteins of other body fluids (saliva and urine)
   133698174
  Exosomal proteins of colorectal cancer cells
   133698174
  Exosomal proteins of bladder cancer cells
   133698174
GTP-binding proteins [BR:pnz04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    133698174
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA ATP_bind_1 RsgA_GTPase nSTAND3 AAA_16 AAA_7 Septin PduV-EutP NTPase_1 AAA_24 cobW AAA_22 ATPase_2 SRPRB MCM NACHT AAA_14 AAA_5 ATP-synt_ab NB-ARC
Other DBs
NCBI-GeneID: 133698174
NCBI-ProteinID: XP_061977006
LinkDB
Position
7:6692187..6694838
AA seq 206 aa
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDHLNNWREEFLIQASPSDPENFPF
VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGVNVEEAFQCIAKNALKSG
EEEEIYLPDTIDVGSSSQPRSTGCEC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgccttcccgtagaagaactctcttgaaggttatcatcctcggcgacagcggggtagga
aagacctctttgatgaatcaatatgtaaataagaagtttagcaatcaatacaaggcgaca
attggagcggattttttgactaaggaagttcagtttgaagataggctcttcactttacag
atttgggatactgctgggcaggaaagattccaaagccttggtgttgctttctatcgtggt
gctgattgttgtgtccttgtatatgatgtcaactcgatgaaatctttcgaccatcttaat
aattggagggaagaattcctcattcaggcaagtccttcagacccagagaatttcccattt
gttgttcttggaaacaaggtcgatgtggatggtggaaatagcagagtggtttcagagaaa
aaggcacgggcatggtgtgcttcgaaagggaatatcccttactttgagacctctgccaag
gaaggtgttaatgttgaggaagctttccaatgcatagcaaagaatgccctgaagagtgga
gaagaggaagaaatatacttgccagacaccatcgatgttggaagcagcagtcagcctagg
tcaacgggatgcgagtgctaa

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