Populus nigra (Lombardy poplar): 133698195
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Entry
133698195 CDS
T10372
Name
(RefSeq) DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133698195
Enzymes [BR:
pnz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133698195
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
133698195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
133698195
NCBI-ProteinID:
XP_061977029
LinkDB
All DBs
Position
7:12897709..12908907
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AA seq
1030 aa
AA seq
DB search
MSSANPHIFSTKKIDPLIAFDKKPSILSLINSKPSTVMWRNVAKQAILKPQSKSLNFPSF
PRTHSFLGAPQEPIFFEKSKFHSVNNSSPQLGFRRIGEISTHEDYMGKPSFGFLRNGDSS
NGNLCSGLCPRGYESVAEAVSSTDVEDNVVVDEELQELLQETRKEEEKEKDFRRRRRLHA
NRGMGSGKYKALRRRQVKIEAEAWEQAAKEYKELLKDMCEHKLAPNLPYMKGLFLGWFEP
LRDAIAKEQESIRRGKTRPDYAPFFDLLPADMMSVITMHKLTAMVMIGGEHGCARVVAAA
CMIGDAIEQEIRIHNFLEKTKKKKENADNSKNSVEGESPAVMNEEEKLRKKVTDLIKKQK
LPAVRKIVKGHDDSKSWSTDAKAKVGSRLIELLLQTAYIQPPPDQLADSPPDLRPAFVHT
FRTVSYENKKTSRKYGVIQCDSLVLKGLEQTDRHIVIPYMPMLVPPLRWRGYDKGAHLFL
PSYVMRIHGAKQQREAVKRTPKKQLQLVFEALDTLGNTKWRVNKRVLSVVDRIWNNGGRL
ADLVDRSDVPLPEKPETEDEALLKKWKWKVKSVKKENRERHSRRCDTELKIAVARKMKNE
EGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAC
GVDKLSHEGRIAFAETHLDDIFDSADKPLEGKRWWLHAEDPFQCLAACINLTEALRSSSP
ETCLSHIPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPTDVYSGIAARVLDIMRRD
AQEDPEVFPDALRARILISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGLTDNSE
IFGCSCYAAKVTLTALGEMFEAARSIMNWLGECAKIIASENEPVRWTTPLGLPVVQPYRK
LGKHVIKTSLQFLTLQKETDTVMVKRQRTAFPPNFVHSLDGTHMMMTAVACKRAGLKFAG
VHDSYWTHACDVDEMNRILREKFVELYETPILKSLLESFEKSFPTLSFPPLPEWGDFELR
QVLESPYFFN
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgccaacccccatatattctctaccaaaaaaattgatcctttgattgctttt
gataagaaaccctcaattctatccctaatcaattcaaaaccatccacagttatgtggaga
aacgttgcaaaacaagccattttgaaaccccaatcaaagtctctcaatttcccttcattt
ccaagaactcacagctttttaggagcccctcaagaacccatcttttttgagaaatccaag
ttccattcagttaataactcaagtccacagctgggtttccgccgaattggcgaaatatca
acccatgaggattatatgggaaaacctagttttggttttttgagaaatggtgatagtagt
aatgggaatctgtgtagtgggttgtgtccaagaggatatgagagtgtagctgaggcagtg
tcatcaacagacgttgaagataatgtggttgttgatgaggaattgcaagaattgttgcaa
gaaacgaggaaagaagaggagaaagagaaggactttaggaggagaaggaggctacatgct
aaccgtggaatggggtcagggaagtataaggccttacggagaaggcaagtgaagattgag
gctgaagcatgggaacaggcagcgaaagaatataaggaacttctaaaggatatgtgtgag
cataagttggctcctaatttgccatatatgaagggtttgtttcttggttggtttgagcct
ttgagagatgcaattgcgaaagagcaggagtcgattagaagggggaagaccagaccggat
tatgctccgttttttgatctgttgccagctgatatgatgtctgttattactatgcataag
ctcacagcaatggtgatgataggtggggaacatggatgtgcaagagttgtggctgctgct
tgtatgattggtgatgcaattgagcaggagattaggatacacaatttcttggagaaaaca
aagaagaaaaaggaaaacgctgataatagcaagaatagtgtagaaggtgaatcccctgct
gtcatgaacgaagaagagaagttaagaaaaaaggttactgatttgattaaaaaacaaaag
ctgccagcagtgaggaagattgtgaaggggcacgatgattcaaaatcatggagcacagat
gctaaggccaaggtcggcagccgtctaattgaattgctgttacaaacagcttatatacag
cctcctcctgatcagttagctgatagtccacctgatcttcgacctgcatttgttcacacg
ttcagaactgtgtcatatgaaaataagaagacttccagaaaatatggtgttattcaatgt
gactcgctagtcctcaaaggccttgagcaaactgataggcacatagtgattccttatatg
ccaatgttggtgccaccgcttcgatggagaggttatgataaaggtgcacacctgttctta
ccatcctatgtcatgcggatacatggtgctaaacagcaacgtgaagcagttaagaggaca
cctaagaagcagctacagctagtttttgaggccctggatacattaggaaataccaaatgg
agggtaaataagagggtacttagtgttgttgatagaatatggaataatggaggtcgtctt
gctgatttggtagaccgcagtgatgttcctttacctgagaagccggaaacagaagatgaa
gcactgctaaagaagtggaagtggaaagtcaaaagtgtgaaaaaagagaacagggaaaga
cattcacggcgttgcgacacagaacttaaaattgctgtagcacggaagatgaaaaatgaa
gaaggtttctattatccacacaatcttgactttcgtggccgtgcctaccccatgcaccca
tatttaaaccatctcggctcagatctgtgccgggggattttggagtttgcagagggacgc
cctcttggaaagtcaggcttacgctggctgaagatacaccttgcaaatctgtttgcttgt
ggtgtagacaagttatcccatgagggacgaatagcttttgctgagactcaccttgatgat
atatttgattctgcggacaaaccacttgaaggaaagcgttggtggttgcatgcagaagat
ccgtttcagtgcttggctgcgtgcattaacctcactgaagctttgagaagctcctctcca
gaaacatgcctttcacatattcctattcatcaggatggttcctgcaatggtctgcaacac
tatgctgcacttggaagagacaagttgggagcagctgctgttaatctagttgctggagag
aagcccacagatgtctactcaggaatagctgctagagtacttgacatcatgcggagggat
gcacaggaagatccagaagtttttcctgacgctttgcgtgcaagaatattaatcagtcag
gtggataggaaattggtgaagcagacagtgatgacatctgtgtatggtgtgacttacatt
ggtgctagagaccaaatcaaaaggaggttaaaggaacgtggtctcacagacaattcagag
atcttcggttgttcttgctatgctgcaaaggtgaccttaactgccttaggagagatgttt
gaagccgcacgaagtatcatgaactggcttggggaatgtgcaaagattattgcatctgaa
aatgagccagtgcgatggacaactccactaggacttcctgttgtacaaccttaccggaaa
ttagggaagcatgttatcaaaacctccctacagtttttaacactacaaaaggaaactgac
acggttatggtcaaacgacagagaacagctttcccaccaaattttgttcattcccttgat
ggaacccatatgatgatgactgcagttgcctgcaaaagggcaggcttaaaatttgcagga
gttcacgattcatattggacgcatgcatgtgatgtggatgaaatgaacaggatactgagg
gaaaagtttgttgaactctatgaaacacctatattaaaaagtttgttggagagcttcgaa
aagtcctttcctacactgtcttttccgcctttgcctgaatggggagactttgagttgagg
caagtgttggaatcaccttatttcttcaactga
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