Populus nigra (Lombardy poplar): 133698377
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Entry
133698377 CDS
T10372
Name
(RefSeq) vacuolar protein sorting-associated protein 24 homolog 1-like
KO
K12193
charged multivesicular body protein 3
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133698377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133698377
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133698377
Membrane trafficking [BR:
pnz04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
133698377
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133698377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
HTH_11
HTH_26
ArsR
HTH_6
PSD4
NagA_C
HH_RND_rel
Motif
Other DBs
NCBI-GeneID:
133698377
NCBI-ProteinID:
XP_061977261
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All DBs
Position
7:1723282..1726376
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AA seq
225 aa
AA seq
DB search
MEKVMNIIKPKANPQQQLRDWQRRLRQECRNIERQIRDIQREEKTVQKAIRDAAKRNDMV
SAKALAKEIVMSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNDLM
KAPDVAVTMQEFSKEMTKAGVIEEFVNDALDSALDSEDMEEEIEEEVDKVLTAIAGETAA
ELPAAVRKERVKQSAQMEEEEAIAEGVDDEGELEEIRARLASVRS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtaatgaacataataaagccaaaggcaaatccacagcaacaactcagagat
tggcagcgcaggctacgccaagagtgccgcaacatcgagcgtcaaatccgagatatacag
agagaagagaaaactgtacaaaaagcaattagagatgctgctaaaagaaatgatatggtc
tcagccaaggcacttgccaaggaaattgtgatgtctagaagaacagtaaaccgtctttat
gaaaataaggcacagatgaattcaatatcaatgcatcttggagaaagtgtcgcgattgcc
cgtacagtgggccatttgtccaagagtgctgaggttatgaagcttgtcaatgatctcatg
aaggctccagatgtggctgttacgatgcaagagttcagcaaagaaatgaccaaggcaggg
gtgattgaggagtttgtgaatgatgcccttgacagtgcgctggattcggaggatatggaa
gaggagattgaagaagaagttgacaaggtattgactgctatagctggcgagactgcagca
gagctaccagcagcagtcaggaaggagagagtgaagcaatctgcccagatggaagaggaa
gaagctatagctgagggtgttgatgatgagggtgaactcgaagaaataagggcacgactt
gccagcgttagatcataa
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