KEGG   Populus nigra (Lombardy poplar): 133698608
Entry
133698608         CDS       T10372                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133698608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pnz03041]
    133698608
Spliceosome [BR:pnz03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133698608
 Complex B
    133698608
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 133698608
NCBI-ProteinID: XP_061977572
LinkDB
Position
7:3783961..3786776
AA seq 322 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITP
GVDAQGNPIDPRRIQQHFEEFYEDLFEELRKYGEIESLNVCDNLADHMVGNVYVQFREEE
HASNALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENACNRGGYCNFMHLKRIGREL
RSQLFGSYRRRRSHSRSRSRSPYRHRSHEEHSHSGRGSGRRYDDREHYYESRSRRHRSTS
PGHRKGRSRSPAGRRKRSPVREGSEERRAKIAQWNREREQQEGTANNNVNADSSNNDNGQ
MQNGSGQEYQQHIPPQQGEYAY
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcgtcgatattcggaacagagaaagacagagtgaactgtccgttt
tacttcaagatcggagcttgtagacacggtgatcgatgctctcgtctccacaccaaacca
agcgtcagccctacgcttcttttatcaaacatgtaccagcgccctgatatgattactcct
ggtgttgacgcccagggtaaccctatcgatcctcgcaggatccagcaacacttcgaggaa
ttttatgaggatttatttgaggagctaagaaaatacggggaaattgagagcctgaatgtc
tgtgacaatcttgctgaccacatggtgggtaatgtttatgttcagttcagagaggaagag
cacgcttcgaatgcgcttaagaatttgactgggaggttttatgctggtcgtcctatcatt
gtggatttctcgcctgtgactgatttccgagaagccacgtgtaggcaatatgaggagaac
gcatgtaaccgtggcgggtactgcaattttatgcaccttaaaagaatcggcagggagttg
aggagtcagttatttgggagttaccgaagaaggcgtagccacagccgaagcaggagcagg
agcccctatagacatcggagccatgaagagcattcacatagtgggcgtggttctggtcga
agatatgatgatcgggagcactattatgaaagtcggagcaggaggcataggagtacaagc
cctggacatcggaagggacgaagtagaagccctgcggggaggcgtaaacgaagcccggtt
agggaaggcagtgaggagaggcgtgctaaaattgcacaatggaatagggaaagggagcag
caggaaggaacagccaataataatgtcaatgctgacagcagcaacaatgacaacgggcaa
atgcaaaatggcagcggtcaagaatatcagcagcacataccaccgcagcaaggagaatat
gcatactga

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