Populus nigra (Lombardy poplar): 133698789
Help
Entry
133698789 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133698789
KO
K10644
E3 ubiquitin-protein ligase CHFR [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133698789
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133698789
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133698789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CRD
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_5
KH_PARP14_5
zf-CCHH
DUF8106
Zn_ribbon_FGT1_2
Phostensin_N
DUF5817
Zn_ribbon_FGT1_1
zf-RING_6
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
133698789
NCBI-ProteinID:
XP_061977839
LinkDB
All DBs
Position
7:complement(8179511..8188053)
Genome browser
AA seq
463 aa
AA seq
DB search
MEFGECSSGSNSSSSNEVWAKLVPSDSRYSDVEIRSNEMVICSEITSSSLEKHEWCKITR
NSDQSSAMMQNKSSNTILVDEATVQNEDDVVINCGSEIIPGPAREGYLSYRFKLMPRESF
TRWLKVSIDAEHAKCSICLNVWHDVVTVAPCLHNFCNGCFSEWLRRSQERHASVLCPQCR
AVVQFVGRNHFLHSIEEDVLQADSSLKRSDEEIILLDSYASIKSNLIIQTGKKRRRKRPH
SILDAENEIADFPCPQCGTEYSGFHCNQNTVHLQCQACGGMMPSRADIGVPQHCLGCDRV
FCGAYWHAQGVSRSDTHSICSHENFKPISEHAVSRIPFLAHEKNRHEQDITERCIGQMGK
TLQDVISDWIGKLNNREIDRTRMPLNHAEMITVGTHVCNDCYDKLISFLLYWFRISMPKY
LLPPEAANREDCWYGYACRTQHHNEDHARKRNHVCRPTRGNHA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaatttggtgaatgctcttctggttccaattcctcctcctccaatgaagtctgggcc
aaacttgtaccatctgactcgagatattctgatgttgagataaggtcaaatgagatggta
atctgctcagagattacatcttcttctcttgagaagcatgaatggtgcaaaataacaagg
aattcagatcaaagttctgctatgatgcaaaataagagctcaaatacaatacttgttgat
gaggccactgtccaaaatgaagatgatgtagtgataaattgcggaagtgaaattattcct
ggccctgccagagaaggatatttgagctacagatttaaactaatgcctcgagagtctttc
acgagatggttaaaggtcagtatagatgctgagcatgcaaaatgcagcatttgcttaaac
gtatggcatgatgttgttactgttgctccttgtcttcataacttctgcaatggatgcttt
tcagaatggctgaggagatcgcaagaaagacatgcaagtgtgctctgtcctcagtgtaga
gcagtagtacagtttgttggtagaaaccactttctgcatagtatagaagaggatgtattg
caagccgattcttcactaaagcggtcagatgaagaaataattcttttggattcctatgca
tcaataaaatcaaatcttatcattcaaactggaaaaaagcgtcgtcgaaagaggccacac
tcaattttggatgctgaaaatgaaattgcagatttcccatgtcctcaatgtggtactgag
tacagtggcttccactgcaatcagaatacagttcacttacagtgccaagcctgtggaggg
atgatgccttctcgagctgatattggagtaccacagcactgtttgggatgtgatagagta
ttttgtggtgcctattggcatgctcaaggtgtttccagaagtgacactcactctatttgc
agccatgagaattttaaaccaatctcagagcatgctgtctctaggattccatttttggca
catgaaaaaaaccggcatgaacaagatatcacagaaaggtgtatcggacagatgggaaaa
acactgcaggatgttatttcagattggattgggaagctgaacaacagagaaattgatcga
acaaggatgccactgaatcatgctgagatgataactgttggaacccatgtttgcaatgat
tgttatgacaagttgatctcctttctgctatactggttccgtatttcaatgcctaaatat
ctccttccgccagaagcagctaacagggaagattgctggtatggttatgcctgccggaca
cagcaccataatgaagaccatgcgcgtaaaagaaatcatgtttgccgccctacaaggggt
aatcatgcataa
DBGET
integrated database retrieval system
