Populus nigra (Lombardy poplar): 133698887
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Entry
133698887 CDS
T10372
Name
(RefSeq) autophagy-related protein 8B
KO
K08341
GABA(A) receptor-associated protein
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04136
Autophagy - other
pnz04145
Phagocytosis
pnz04156
Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
133698887
04136 Autophagy - other
133698887
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
133698887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133698887
04121 Ubiquitin system [BR:
pnz04121
]
133698887
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133698887
Membrane trafficking [BR:
pnz04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
133698887
Ubiquitin system [BR:
pnz04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
133698887
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133698887
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG8
APG12
DUF2201
Motif
Other DBs
NCBI-GeneID:
133698887
NCBI-ProteinID:
XP_061977975
LinkDB
All DBs
Position
7:21674432..21676741
Genome browser
AA seq
119 aa
AA seq
DB search
MDRSSFKLDHTLERRQAEASRIREKYPDRVPVIVERAERSDIPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLGPEKAIFVFVKNTLPSTASLMSAIYEENKDEDGFLYMTYSGENTFGLH
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagttcattcaagcttgatcatactttggagaggaggcaagcagaagcttct
cgcatcagagagaaatatcctgatagagtacctgtgattgtggaaagggctgaaaggagt
gatatccctgacattgataagaagaaatatctcgtgccagctgatttgactgtgggtcag
tttgtttatgttgtccggaaaaggatcaagctgggtcctgagaaggctatatttgtcttt
gtaaaaaacactctgccttctaccgcttcattgatgtctgcaatctatgaggaaaacaag
gatgaagatggttttctttacatgacatacagtggggagaatacctttggattgcactag
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