Populus nigra (Lombardy poplar): 133698951
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Entry
133698951 CDS
T10372
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnz01009
]
133698951
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnz03021
]
133698951
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
133698951
Protein phosphatases and associated proteins [BR:
pnz01009
]
HAD phosphatases
Fcp/Scp phosphatases
133698951
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133698951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
133698951
NCBI-ProteinID:
XP_061978047
LinkDB
All DBs
Position
7:complement(19552795..19562688)
Genome browser
AA seq
996 aa
AA seq
DB search
MYKSVVYKGDELLGEVEIYAQEQQQEEEENKNKKKRVIDEIVKEIRISHFSQTSERCPPL
AVLHTITSIGVCFKMEESTSSSTTKISQQESPLHLLHSSCIQENKTAVMHLGGEELHLVA
MPSRSNERQHPCFWGFSVAPGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDA
LQRKISTEVDPQRILGMLSEVKRYHDDKNILKQYVENDQVVENGKVIKTQSEVVPALSDN
HQPMVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTM
AERDYALEMWRLLDPESNLINSKELLDRIVCVKSGLRKSLFNVFQDGICHPKMALVIDDR
LKVWDERDQSRVHVVPAFAPYYAPQAEVNNAVPVLCVARNVACNVRGGFFKEFDEGLLQK
IPEVAYEDDTDNIPSPPDVSNYLVSEDDASAVNGNRDQISFDGMADAEVERQLKEAVSAS
SAILSTIPSTVSSLDPRLLQSLQYTIASSSSSMPTSQPSMLASQQPMPALQPPKPPSQLS
MTPFPNTQFPQVAPSVKQLGQVVPPEPSLHSSPAREEGEVPESELDPDTRRRLLILQHGH
DSRDNAPSESPFPARPSTQVSAPRVQSVGSWVPVEEEMSPRQLNRTPREFPLDSDPMNIE
KHRPHHPSFFHKVESNIPSDRMIHENQRQPKEATYRDDRMKLNHPTSNYPSFQGEESPLS
RSSSNRDLDLESERAFSSTETPVEVLQEIAMKCGTKVEFRPALIATSDLQFSIETWFVGE
KVGEGTGKTRREAQRQAAEGSIKKLAGIYMSRVKPDSGPMLGDSSRYPSANDNGFLGDMN
SFGNQPLLKDENITYSATSEPSRLLDQRLEGSKKSMGSVTALKEFCMTEGLGVNFLAQTP
LSTNSIPGEEVHAQVEIDGQVLGKGIGLTWDEAKMQAAEKALGSLRTMFGQYTPKRQGSP
RLMQGMPNKRLKQEFPRVLQRMPSSARYHKNASPVP
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcagtggtgtataaaggagatgagttactgggagaagtagaaatatacgca
caagaacaacagcaagaagaagaagagaacaagaacaagaagaagagagtgattgatgag
atagtgaaggaaatcagaataagccatttctcacaaacaagtgagagatgtccaccactt
gcagtgcttcatacaattacatctattggtgtttgcttcaaaatggaagagtcaacttca
tcatcaacaacaaagatctctcaacaagaatcgccgcttcatcttttgcactcctcctgt
atccaagaaaacaagactgcagtgatgcatctgggaggggaggagctccatttggttgca
atgccctccaggagtaatgaaagacagcatccatgtttctggggattcagtgttgcacca
ggactttatgactcttgtcttgtcatgctgaatctcagatgcctgggcattgtatttgat
cttgatgaaactctcatagttgcaaatacaatgcgctcatttgaagatagaattgatgct
ttgcagcggaaaataagcactgaggtggacccgcagcgcattcttggtatgctgtcagag
gtcaagaggtatcacgatgacaagaacattttgaagcaatatgtggaaaatgatcaggtt
gttgaaaatggaaaggtgatcaaaacacagtctgaggttgttccagccctgtctgacaac
catcaacctatggttcgccccttgatacggttgcaagagaagaacattattttgactcgt
atcaatccgcagattcgtgatacaagtgtgcttgtgaggttgagacctgcttgggaggat
ctgagaagctacttgactgcaagagggcgcaagcgctttgaggtttatgtttgcacaatg
gctgaaagagattatgctttagaaatgtggaggcttttggatccagagtcaaacttgata
aactcaaaagaattgctagatcggattgtgtgtgtcaagtctggtttaaggaagtccttg
ttcaatgtctttcaagatggaatatgccatcctaagatggcattggtgattgatgatcgc
ttgaaagtgtgggatgagagggatcaatcccgtgtgcatgttgttcctgcatttgctcca
tactatgctcctcaagctgaagtaaataatgctgttccagtattgtgcgttgcgagaaat
gttgcttgcaatgtcagaggtggtttcttcaaagaatttgatgagggccttctgcagaag
atacctgaggttgcatacgaagatgatactgataatattccttctcctcctgatgtgagc
aactatttagtttcagaggatgatgcttctgctgtaaatggaaatagagatcaaatttct
tttgatggcatggcagatgctgaggttgaaagacagctaaaggaagcagtttcagcttct
tcagcaatcctctcaacaattccttcaacagtcagtagcttagatccaaggcttcttcag
tctctccagtacacaatagcatcttcttcaagctcgatgccaacatcacaaccatcaatg
ctggcatcacaacaaccaatgccagcattacaaccaccaaagcctccatcacaactatca
atgacgccatttcccaacacacagtttcctcaggtggctccatcagttaaacaattgggc
caggttgtccctccagaaccaagcttgcatagttctcctgctcgagaagagggtgaagta
cccgaatctgaattagatcctgatacaaggaggcggcttcttatattacaacatgggcat
gattcaagagacaatgcaccaagtgagtctccatttcctgcaagaccttcaacacaagtt
tcagctccacgtgttcaatctgttggaagctgggttccagtggaggaagagatgagccca
aggcaactgaaccgaacacctagagaatttcctctggattcagatccaatgaatattgaa
aagcaccgacctcaccatccatcctttttccataaggttgagagtaatattccgtctgat
aggatgattcatgagaaccaaagacagccaaaagaggcaacatatagagatgatcggatg
aagctaaaccatccaacatctaattatccttccttccaaggggaggagagtccattgagt
agatcatccagtaacagggatcttgacttggaatctgaacgagctttttcaagcacagaa
actccagttgaagtgttacaggaaattgcgatgaagtgtggaaccaaggtggaattcagg
cctgctttgattgctactagtgatctgcagttttccattgagacttggtttgtaggagag
aaagttggtgaaggaactggtaaaacaagaagggaagcccaacgccaggcagctgagggt
tctattaagaagttagctggcatatatatgtcacgtgtgaagcctgattctgggcccatg
cttggggattcaagtagatatcctagtgcaaatgataatggtttcttgggtgatatgaat
tcttttgggaatcaaccattgctgaaagatgagaacattacgtattcagctacttcagag
ccatccagacttctggatcaaaggctggaaggctctaagaaatcaatgggttcggtcact
gcactcaaagaattttgcatgacagagggtcttggggtaaattttctggcacagactcca
ctttcaactaattcaataccgggagaggaggtacatgcacaggttgaaatagatggacaa
gttctggggaagggtattgggttgacatgggatgaagctaagatgcaggctgctgaaaag
gcccttggaagtctaagaacaatgtttggtcaatacacaccgaaacgtcagggttcccct
aggctaatgcaagggatgccaaataaacgtctaaagcaagagttcccacgggttctgcag
cgcatgccctcttctgctagatatcacaagaatgcttctcctgttccttga
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