Populus nigra (Lombardy poplar): 133699108
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Entry
133699108 CDS
T10372
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03420
Nucleotide excision repair
pnz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133699108
09124 Replication and repair
03420 Nucleotide excision repair
133699108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pnz03051
]
133699108
03400 DNA repair and recombination proteins [BR:
pnz03400
]
133699108
Proteasome [BR:
pnz03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
133699108
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
133699108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
TECR_N
UBA_RAD5A
Crinkler
Dsc3_N
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
133699108
NCBI-ProteinID:
XP_061978230
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Position
7:complement(14158153..14168323)
Genome browser
AA seq
404 aa
AA seq
DB search
MKVFVKTLKGTNFEIEVKPEDTVADVKKNIESVQGADVYPAAQQMLVYQGKVLKDDTTLD
ENKVSESSFFVVMLSKSKVSSGGTSTAPAEPPSQSKVSSGGPSTAPVAPPSQAPPATSLP
SNVTQPSITSQAPVPAAALPQSAAESSPAVVTSALSLDTNMYGQAASNLVAGSNLEATIQ
EILDMGGGDWNRETVVRALRAAFNNPERAVDYLYSGIPEQAEVPPVAPVVQGPASGNAAN
PPALAPQPVVAPNSGPNANPLDLFPQGHHSTGSNAGTGNLDFLRNSQQFQALRAMVQANP
QILQPMLQELGKQNPYLMRLIQEHQADFLRLINEPVEGEGNVLGQLASAMPQAVTVTPEE
REAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttgtaaagactttgaagggtaccaacttcgagatcgaagttaaacctgaa
gatacggtggctgatgttaagaaaaacatagagagtgtacagggagcggatgtttatcca
gcggcacaacagatgctagtttatcaagggaaagtactcaaggatgatacaacattggat
gaaaataaagtttctgaaagtagtttttttgttgttatgttaagcaagagtaaggtttca
tctggtggaacctcaactgcacccgctgaaccaccaagccaaagtaaggtttcatctggt
ggaccctcaactgcaccggttgcaccaccaagccaagccccacctgcgacttccttgcct
tctaatgtgacacaaccatcaataacatctcaagctcctgtaccagctgctgctttgcca
caatctgctgctgaatccagtcctgctgtagttacttcagctctcagtttagatacaaac
atgtatgggcaagcagcatcaaatctcgttgcaggaagtaatttagaagcaaccattcaa
gagattcttgatatgggtggaggagactggaaccgagaaacagttgttcgtgctctacgt
gctgcattcaacaaccctgaacgagctgttgattatttatactctggtattccagagcaa
gctgaagttccaccagttgccccagttgtccaaggtccagcaagtggcaacgctgcgaat
cctccagctctggctccacaaccagttgtggctcctaatagcggtccgaatgcaaatcca
ctagatctctttccacagggccatcacagtacaggttctaatgctggtacaggcaacttg
gattttttacgcaatagccaacagttccaagccttgcgagctatggtgcaagcaaaccct
caaatcctacagccgatgcttcaggagcttgggaagcaaaatccatacctgatgcgtctc
attcaagagcatcaggctgatttcttgcgcttgataaacgaacctgttgaaggagagggg
aatgtgctgggccaattggcctctgcaatgccacaagcagtgactgtcacccctgaggag
cgcgaggcaattgaacgtcttgaagcaatgggctttgatcgagccatagtattggaggtg
tattttgcatgcaacaagaatgaagaactggcggccaactatctattagaccacatgcat
gaattcgacgaatga
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integrated database retrieval system
