KEGG   Populus nigra (Lombardy poplar): 133699218
Entry
133699218         CDS       T10372                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133699218
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pnz03019]
    133699218
   03041 Spliceosome [BR:pnz03041]
    133699218
Messenger RNA biogenesis [BR:pnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133699218
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133699218
Spliceosome [BR:pnz03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133699218
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 133699218
NCBI-ProteinID: XP_061978365
LinkDB
Position
7:18254649..18256743
AA seq 384 aa
MDFIKKRKADENGISIPTGTSPPSPITPLTPEEIRKILEPFTKDQLLDILQSATLHHSDI
LNSVRSVADGDISLRKLFIRGLSSETTSDTLRILFSSFGELEEAIVIHDKNTGKSKGFGF
ITFKHVDSAMLSIREPSKKIDGRITVTQLASNNSSTGDVSLRKVYVGNVPFEITSERLLG
FFSMYGEIEEGPLGFDKSTGKSKGFAFLIYKSEDGAKAAIADPMKNIDGHQVVCKLAVDN
KRVNKTSQGGANAQNSQPLAHPSFSQPQPQNSIGGATGSLQNYGPASNSYQLNTSLTSSG
YNGAYRVPPYVGAGPNDGGLNTAGASMYRMPQSTVGTGSGVYPDAGSYALSQQQQHQQPS
SMPLPPRFPHGAGGMYQGMPPPYY
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggatttcattaaaaaacgcaaagccgacgaaaacggcatctcaatccccactggtacc
tctccaccatctccaataactcctctaacccccgaagaaatccgtaaaatcctcgaaccg
ttcacaaaagaccaactattagacatcctccaatcggccacgctccaccactctgacata
cttaactctgtccgttccgtagcggatggcgacatctccctccgaaagctcttcattcgc
ggcctctcttccgaaacaacctcggataccctccgaattctattttcttccttcggagaa
ctcgaagaagctattgttatccatgacaagaacacaggtaagtcgaaaggtttcgggttt
attactttcaaacatgtggactctgctatgctttctattagagaacctagtaaaaaaatt
gatggaaggattactgttactcaattagcatcgaataattcgagtaccggtgatgtttcg
ctaaggaaagtttatgttgggaacgtgccttttgagattacctcggagaggttgttaggg
tttttctcaatgtatggtgagattgaagaaggcccgcttgggtttgataaatctactggg
aaatcaaagggttttgcctttcttatatataagtctgaggatggggcaaaggctgcgatt
gctgatcctatgaaaaatattgatgggcatcaagttgtttgtaaattagctgttgataac
aagagggttaataagactagtcagggcggtgcaaatgcacaaaattcacagccattagcg
catccatcgttctcacaaccacaaccacaaaattcgattggcggggcaacaggaagctta
caaaattatgggcctgcgagtaatagctatcagttgaatacttcattgacgagttctgga
tataatggtgcttatagggttccgccgtatgtaggggcgggtccaaatgatggtggattg
aacactgcaggggcttcaatgtatagaatgccacagagcactgttggtaccggttctggg
gtgtatccagatgctgggtcttacgctttgtctcagcaacagcagcatcagcagccatcc
tcaatgccactgcctcctagattcccacatggagctggagggatgtatcagggtatgcca
ccaccatattactga

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