Populus nigra (Lombardy poplar): 133699251
Help
Entry
133699251 CDS
T10372
Name
(RefSeq) auxin response factor 1-like
KO
K14486
auxin response factor
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133699251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
133699251
NCBI-ProteinID:
XP_061978416
LinkDB
All DBs
Position
7:708465..720076
Genome browser
AA seq
662 aa
AA seq
DB search
MAFAAMNHTSGGNSHAGGCNDALYKELWHACAGPLVTLPREGELVYYFPQGHMEQLEAST
HQGMEPQMPLFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPEP
ERCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHF
RHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQMNMPSSV
ISSQSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSLNKYLEVRNHKLSVGMRFKM
RFEGEEVPERRFSGTIVGVGDNISSGWADSDWRSLKVQWDEPSSIMRPERVSHWELEPLV
ATTPSNSQPVQRNKRARPYVIPSPTADLSALGMWKSPVESSALSYGDSQRGRDLYSSPNF
STTAKVNSLGFRGNGQVASVSHNSMHWPNRVESVTDSFAPVVNKDSGERRQGTGIGYKLF
GIQLVENSNTEGTSPVVVSGTVVDDHPVLSLEAESDQHSEPEKSCLRSSQELQSRQIRSC
TKVHMQGVAVGRAVDLTQFKRYEDLLRKLEEMFDIEGELSGSAKKWQVVYTDNEDDMMKV
GDDPWNEFCGMVKKIFIYTSEEVKRLSPKIKLLAEEEVKGIGDNADAAVNTEDRSSTIGP
GC
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgcggctatgaatcatacctccggaggaaattcccatgcagggggatgcaat
gatgctctgtacaaagaactatggcatgcctgtgctggacctcttgtcactcttcctcgt
gaaggggagctagtttattattttccacaaggtcacatggaacagcttgaagcttcaacg
catcaggggatggagccgcaaatgccattgtttaatcttccatctaaaatactgtgtaaa
gtagttaatgttcagcgcagggctgaacccgaaacagatgaagtttatgcccagataaca
ctacttcctgaaccagatcaaagcgaggttactagtcctgatcctccactcccagaacct
gaaagatgcacagtccattcattttgcaagacacttactgcttctgacacaagcactcat
ggtggtttctctgttcttcgaaggcatgcagatgattgtctgcctcctttggatatgtct
cagcagccaccctggcaggaattggttgcaactgatctgcatggcaatgaatggcatttt
cgacacatttttcgaggccaaccaaggcgtcacttgctcacgacaggttggagtgtcttt
gttagctccaaaaagttagttgcgggtgatgcattcatcttcctcagaggagaaaatggt
gagcttcgtgtgggagtaaggaggctgatgaggcaacagatgaacatgccatcttctgtt
atatctagccaaagcatgcatctaggggttcttgctactgcttctcatgccattgcaact
ggaacccttttttccgtcttctataagccaagaacaagtcgatctgagttcattgtaagt
cttaacaagtatcttgaagttcgaaaccacaagctttctgtagggatgaggtttaagatg
agatttgagggcgaggaagttcctgaacgaaggtttagtggtaccattgtcggcgttgga
gataatatatcatcaggatgggctgattctgattggaggtccttgaaggtccagtgggat
gaaccctcatccatcatgcgtccagagagggtatcacactgggaattggaaccgcttgtt
gcaactactccttcaaactcccaacctgtgcaaaggaacaaacgggcacgaccatacgtc
ataccctcaccaactgcagatctttctgcactaggtatgtggaaatcccctgttgagtcc
tctgctttatcatatggtgattcacaacgcggacgagacctttattcatcacccaatttc
tctaccactgctaaggtcaattctcttggcttccgaggcaatggtcaagtggctagtgtt
tcccataactcaatgcattggcctaatcgagtggaaagtgtcacagactcttttgctcca
gttgtaaacaaagattctggggaaaggagacagggcactggaattggctacaaactgttt
gggattcaacttgttgagaattccaacacagaaggaacttcaccagtcgttgtgtctgga
acggtggttgatgatcacccagttctgtctttggaagccgagtctgatcagcattccgag
cctgagaaatcatgtttgagatcttcccaagagttgcaaagtaggcaaattaggagttgc
acaaaggttcacatgcaaggggttgctgttggaagagctgttgatttgacacagtttaaa
cgctacgaagatctgctgaggaaactagaggaaatgtttgatattgaaggtgagctcagt
ggatccgcaaagaaatggcaggttgtctacactgataatgaagatgacatgatgaaggtt
ggggatgatccatggaatgaattctgtggcatggtgaagaagattttcatctatacatct
gaagaagtgaagaggctgtcgcccaagattaaacttctagccgaagaagaggtcaaagga
attggcgacaatgctgatgcagctgttaacacagaggaccgctcatccactattggacct
ggatgctga
DBGET
integrated database retrieval system
