Populus nigra (Lombardy poplar): 133699256
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Entry
133699256 CDS
T10372
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pnz03012
]
133699256
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133699256
Translation factors [BR:
pnz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133699256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
UBA_DHX29
DEAD
HA2_C
Helicase_C
HA2_N
DSRM_DHX29
nSTAND3
DND1_DSRM
AAA_19
AAA_22
ATPase
Motif
Other DBs
NCBI-GeneID:
133699256
NCBI-ProteinID:
XP_061978420
LinkDB
All DBs
Position
7:complement(1177012..1210269)
Genome browser
AA seq
1482 aa
AA seq
DB search
MVSLSLHSAEKTQTQNSQRREKMAPKKKPQRSSGNNKASSSKSKSSSNSGPRLQISAENE
NRLRRLLLNSATTPPLQTTVTDNTNSLSKAQKAKKLKIIYEKLSCEGFSNDHIELALSSL
KDNATFETALDWLCLNLAGNELPLKFSGGTSLNSDRGAVSVVSTAREGWVPYVDSSRRVE
GEEEEQRVLVRTKARWDEEDGDGNVLDFRQPSQADWIRQYVEQQEEEESKTWEDDSVDGS
FTNKDPQPRTCDVIAKEYHAVRLEATKAKEKGDKKSQEQAGHAIRKLKQEMSALGLSLDL
LEQDFGHQHVSEDMFSTSTPCEHLEAITSLDVEGDSTIVESIVDENDLESSSSIGFPLNP
VPSSVPPEGEFVSEESEDVEIGDFFIDDTLSNDASSNDALPPGILELQKREKMRELCSEK
NLEKLEGIWKKGDPQKIPKAVLHQLCQKSGWEAPKFNKVLERELGFSYAVSILRKASGRG
KSRKAGGLISLQLPDQDGTFESAEDAQNRVAAFALHQLFPDLPIHLAIINPYSSLVLQWK
QGETSKRVEDSVEDRRAGFVDLLLKADGSSSSAVDATTSSQETLKITDVEESKDSGADAK
VERKKYAKDAESSYLRQEQESKRKLKKYKEMLCTRAALPIAGLKVDILQMLKENDVLVVC
GETGSGKTTQVPQFILDDMIESGHGGNCNIICTQPRRIAAISVAERVADERCEPSPGAVG
SLVGYQVRLDSARNEKTKLLFCTTGILLRKLAGDRSLSGITHVIVDEVHERSLLGDFLLI
VLKNLIEKQSSQDTPKLKVILMSATVDSNLFSRYFGQCPVLTAQGRTHPVTNYFLEDIYE
YINYNLASDAPAALRYETSAFDKSGPVDNHRGKKNLVLSAWGDDSQLSEDCINPHYISTS
YQTYSEQTQKNLKRLNEEIIDYDLLEDLMCYVDETCGEGAILIFLPGVSEIYMLLDRLVA
SYRFGGPSSDWVLPLHSSIASKDQKKVFLWPPENIRKVIIATNIAETSLTIDDVVYVIDC
GKHKENRYNPQKKLTSMVEDWISQANARQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQV
PEMLRMPLVELSLQIKLLSLGHIKPFLSKALEPPREEAMTSAISLLYEVGALEGDEQLTP
LGHHLAKLPVDVLIGKMLLYGAIFGCLSPILSISAFLSYKSPFVYPKDEKQNVERAKLAL
LADKIDGSNDSNYNDRLSDHLLMMVAYKKWEKILTERGFKAAQQFCATYFLSSSVMHMIR
DMRTQFGTLLADIGLISIPKSYQVGRTKKENLDSWLSEKSQPFNMYSHHSSLVKAILCAG
LYPNVAATELGITAATLNGLKQSSRPGKKDHPIWYDGRREVHIHPSSVNCNMKAFPHPFL
VFLEKVETNKVFLRDTTIISPFSILLFGGEINIQHQTGLLTIDGWLKLKASAQYAVLFKE
LRSTLHALLKELIRKPENATLVDNEVVKSMIQLLLDEDKPQT
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggtctccctttctctgcactctgcagagaaaacccagacccaaaactcccaaagaagg
gaaaaaatggctcccaagaagaagccacagagaagcagcggcaacaacaaagcatcctct
tcgaaatcaaaatcatcttctaattccggtccaaggctccagatttcagccgagaacgag
aaccgcctacgccgtctcctactcaactccgcaaccactccgcctctacaaaccaccgtt
actgataacactaactctctctctaaagcacaaaaagctaaaaagcttaagattatttat
gagaaactctcctgtgaaggcttctctaatgatcatattgaactcgctctttcttctctc
aaggataatgcgacatttgagaccgcgcttgattggttatgcttgaatttggctggaaat
gagcttcctttgaagttctctggcggaacttctctcaattccgatcgaggggctgtcagt
gtggtatcgactgccagggaaggttgggttccttatgtggattcgtctagaagggttgag
ggtgaggaggaggagcagcgagttttggttagaaccaaggcgcggtgggatgaggaggat
ggtgatggtaatgttcttgatttccgccaaccgtcgcaagcggattggattaggcagtat
gtagagcaacaggaagaggaggaatctaaaacttgggaagatgattcagttgatggaagt
ttcaccaacaaggatccacaaccaagaacttgtgatgttattgccaaagagtaccatgca
gtgcgtttggaagctacaaaggccaaggaaaaaggggacaagaagagccaagaacaggca
ggccatgctatccgcaaactcaagcaagaaatgtctgctctaggattatcacttgatctc
ttggaacaagattttgggcatcagcatgtttctgaggacatgttttctacttccactcct
tgtgagcaccttgaggcaataacatcattggacgtggaaggtgattccaccattgttgaa
tcaatagttgatgaaaatgatttggaaagttcaagctccattggttttccattgaatcct
gttccctctagtgtgccccctgagggagaatttgtctcggaagaatcggaagatgtggag
attggcgacttcttcatagatgatacattgtctaatgatgcatcgtctaatgatgcttta
cctcctggaatattggagttacagaagagggaaaaaatgagagagctgtgtagtgagaag
aatttagagaaattagaaggtatttggaagaagggggacccgcaaaagattcctaaagct
gttcttcaccaactatgtcaaaaatcaggctgggaagctccaaaattcaataaagtgctt
gaaagggaactaggtttctcttatgctgttagcatattacgcaaagctagtgggaggggc
aagagcagaaaagctggggggcttatcagccttcaacttcctgatcaggatggcacattt
gaatctgctgaggatgcccagaacagagttgcagcatttgctcttcatcaactctttcct
gatcttcctattcacctagcaatcatcaacccgtactcttctcttgttttgcagtggaaa
caaggggaaacatcaaaaagagtggaagacagtgtggaggatcgaagggctggttttgtg
gatctattattgaaggcagatggttctagttcatctgctgttgatgctacaactagttct
caagaaactttaaaaattaccgatgtcgaagaatccaaggattctggtgctgatgcaaaa
gtagaaagaaaaaaatatgctaaggatgcagaaagttcttatttgagacaggagcaagag
tctaaaaggaaattgaagaaatacaaggaaatgctgtgcactagagctgcacttcctatt
gctggattgaaggttgatattttacaaatgctgaaggagaatgatgttcttgttgtttgt
ggagaaacaggttctggaaagacgactcaggtcccacaatttatactggatgacatgatt
gagtcaggtcatggtggaaactgtaacattatatgcacacaaccaagaagaatagcggct
atatctgtcgctgaaagagttgctgatgagcgttgtgaaccttctcctggtgcagttggt
tctttggttggctatcaagttcggcttgatagcgcaaggaatgaaaaaacaaaacttctc
ttttgtacaacaggcattcttctaaggaagcttgcgggggataggagtttgagtggaata
acacatgtcatagttgatgaagtgcatgaacgatctcttttgggtgattttctactcatt
gttttgaagaacctgattgagaagcaatcttcacaagacacaccaaaacttaaagttatt
cttatgtctgccacagtagattcaaatttattttcgaggtactttggacaatgccctgta
cttactgctcaaggccgtacacatcccgtgacaaattactttcttgaggatatatatgaa
tacatcaattataacctggcttcagatgctccagctgctttaagatacgaaacatctgca
tttgataagagtggtcctgtagataaccacagagggaagaagaatctagttttatctgca
tggggtgatgattctcagctttcagaagactgtattaacccccattatatttcaactagc
taccaaacttacagtgagcaaacacaaaagaatttgaaaagattgaatgaagaaatcatt
gattatgaccttcttgaagacttgatgtgttatgttgatgaaacatgtggtgagggtgcc
atactcatctttttgcctggcgtgtctgaaatttatatgctactcgataggttggttgct
tcttatcgatttggaggaccatcttctgattgggttcttcctttgcattcatctatagca
tcaaaggaccaaaaaaaggtgtttctatggcctcctgaaaacatacgcaaggttattata
gccaccaacattgcagagacaagtttaacaatagatgatgtcgtatatgtgattgattgt
ggaaaacacaaggaaaatcgttataatcctcagaagaaattgacaagcatggttgaagat
tggatatctcaagcaaatgcaaggcagcgccgagggagagctggacgagtaaaacctgga
atttgcttttgcttgtacacacgccacagatttgaaaagctcatgcgtccttatcaggtt
cccgagatgcttcggatgccattagtggagctttctctgcaaattaaattactttctctg
ggacacataaagccatttttatccaaggctttagaacctccaagggaggaggctatgact
tctgcaatttcactgttatatgaggttggagctttagaaggggatgaacaattgacacct
cttggacatcatttggcaaaacttcccgtcgatgtactgattggaaagatgctgctttat
ggtgcaatatttggttgcttatcacctattctgtcaatttctgcattcctgagttacaag
tcaccttttgtgtacccaaaagatgagaagcaaaatgttgaaagggcaaagcttgcactg
ttagctgacaagatagatggctcaaatgattcaaattataatgacaggctttctgaccac
ctcttaatgatggttgcatacaaaaaatgggagaagattttgaccgagaggggatttaaa
gctgcacagcaattttgtgctacttattttttgagcagttcagttatgcacatgataagg
gacatgaggacacagtttggaacactgctagcagacattgggcttatcagtattccaaag
agttatcaggttgggagaacgaagaaagagaatcttgatagttggctgtctgaaaaatca
caaccattcaacatgtattcacatcattcctcacttgtgaaggcaattttatgtgcaggt
ttataccccaatgttgctgcaaccgaactaggaattactgcagcaactctcaatggccta
aaacagtccagcaggcctggaaaaaaggatcatccaatatggtacgatggaagaagagag
gttcacatacacccttcttcggtcaactgtaacatgaaagcatttccgcacccatttctt
gtgttccttgaaaaggttgagaccaacaaagtatttctgcgagatactactattatatct
cccttctctatcttgctctttggtggcgaaattaacattcaacaccagactggtcttctg
acgatagatggatggctaaagctgaaagcttcagcccaatatgctgtcttatttaaagaa
ctccgatcaacacttcatgctctattgaaggagctgattcgaaagccagagaatgcaact
cttgtggataatgaggtcgtcaaatccatgattcagctgttgttagatgaagacaaaccc
caaacatga
DBGET
integrated database retrieval system
