Populus nigra (Lombardy poplar): 133699324
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Entry
133699324 CDS
T10372
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23 isoform X1
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133699324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133699324
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
133699324
Ubiquitin system [BR:
pnz04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
133699324
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-B_UBE2O
UQ_con
SH3-C_UBE2O
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
133699324
NCBI-ProteinID:
XP_061978526
LinkDB
All DBs
Position
7:complement(4917645..4924278)
Genome browser
AA seq
1155 aa
AA seq
DB search
MCFQLENMQNERSPKVNGFVDGGVDKNSWDQSGSMANGLVCELKVDSEKNVKKLDEVVGN
LNNVPYIYGQDIVRHKMHNVVGVVSEVAGESDSDGSIMDDDDDDDDDDDNDDDDEDECDL
DEDAGNEGADGDGNDNTNSDRSEGSDNYKSETLQTDQVRVVWMGDVKPVQHVNDVIVIDR
GFLHGDYVASASDPTGQVGVVVDVNISVDLLAPDGSVRKDVSSINLVRVREFSVGDYVVF
GPWLGRVDDVVDDVTVLFDDGSVCEVKGAEPLHLKPISKGIFEEDEHFPYHPGQRVRATS
SSVFKNSRWLSGLWEANRLEGTVSKVTSGSVFIYWIASAGYGPDSSTTPAEEQDPKNLEL
LSCFAHASWQVGDWCLLPSSVAQSSSVTLDKDLLKLGIHDPAKCELDPSQLGNGCDSEGV
ANEEVDDTNGSMAIDPVTAPDGNVAIIASNESSSCGCSTLPAHRRKIRKVLIRREKKSKK
KEEDFERALLIVNTRTRVDIAWQDGAIERGLNSTTLIPIDSPGDHEFVAEQYVVEKASDD
VDNSFESRRVGVVKSLNAKERTACVKWLKPVTRAEDPREFDKDEIVSVYELETHPDYDYS
YGDVVVRLSPVSVSDQTTSDLETIGESRQQSGQSEIMNTQKCLGRKKGEDAPSNDVSMDS
SDLSWVGNISGLRNGDLEVTWADGMVSMVGPQAIFVVGRDDDDDSVSAGSEVSEAAASWE
TVDDDVRDTHDYTQEAVVLQDATGMNSEEEESVENYSSGRNAARNFPLTALDFVARLATG
IFSRGQKNIDPDFSGYQGENKLHSQGTNCISEEKDSSDESSAEKSNVNNNCGMQNTNGKD
KHVSMEDPGSSNAEKTSCNLSTEKSNAMTCSEARIHHYFKHFDTAEDPLDHHFLDSNRLI
KNGRKWLKKVQQDWNILQNNLPDEIYVRVYEDRMDLLRATIIGAYGTPYQDGLFFFDFHL
PPEYPDVPPSAYYHSGGWRINPNLYEEGKLCLSLLNTWTGRGNEVWHSCSSILQVLVSLQ
GLVLNSRPYFNEAGYDKQIGTAEGEKKSLSYNENTFLLNCKTMMYLMRKPPKDFEYLVKE
HFRRRGYYILKACDAYMQGNLIGSLSRDCSISSKESSNLTSVGFKLMLAKIVPKLYLALN
EVGADCHEFKHLLQS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttcagctagaaaatatgcaaaatgaaagaagtcccaaagttaacgggtttgtc
gatggtggtgttgataaaaacagctgggatcaaagtggttctatggcaaatgggttggtt
tgtgagttgaaagttgatagtgaaaaaaatgttaaaaaactggatgaggttgttgggaac
ttgaataatgtaccatatatttatggacaagatattgttagacataaaatgcacaatgtg
gttggggtagtgagtgaagttgctggtgagtcagattcggatggaagtattatggatgat
gatgatgatgatgacgacgacgacgacaacgacgacgacgacgaagatgagtgtgatctt
gatgaagatgctggcaatgagggagctgatggtgatggtaatgataataccaatagcgat
aggagtgaagggagcgataattataagagtgaaactcttcagactgatcaggttcgagta
gtttggatgggtgatgttaaaccagttcaacatgtcaatgatgtgattgtcattgatcga
ggattcttacacggggactatgttgcatctgcttcagatccaacagggcaagtgggtgtt
gtggtggatgttaatatctctgttgatttgttagctcctgatggatccgttagaaaagac
gtttcatccataaatttggtgcgtgttagggaattttctgttggtgattatgtggtcttt
ggtccctggttaggcagagttgatgatgttgtagatgatgtgactgtgttatttgatgat
ggttctgtgtgcgaagtaaagggggctgagccactgcatctaaaaccaatttccaagggt
atctttgaggaagatgaacattttccgtaccatcccggccagcgtgtaagggctacctca
tcatcagtttttaaaaactctcggtggctatccggcttgtgggaagctaatagattggaa
ggtactgtttctaaagttacatctggatcagttttcatctattggatagcttctgctggc
tatggacctgattcttcaactacccctgctgaagagcaggatccaaagaacttagaactg
ctgtcttgttttgcacatgcaagttggcaagtgggtgactggtgtcttctcccatcatct
gttgctcaatcatcttctgttactttagacaaggatttattgaagttgggaatccatgac
ccagccaaatgtgaattagatcctagtcaactgggaaatggatgtgattcagaaggagtt
gcaaatgaggaagtagatgatacgaatggatcgatggcaattgatccagtgacagcaccg
gatggaaatgtagccattattgcaagtaatgaatctagctcttgtggttgttcaacattg
cctgcccatcgcagaaagatacgtaaagttttaatcagaagagaaaagaagagtaaaaaa
aaagaggaagattttgaaagagcccttttgattgtcaacaccaggacaagggtcgatata
gcatggcaggatggagctatagaacgtgggctgaattctacaacattgattccaattgat
agtcctggtgatcatgaattcgttgctgaacagtatgttgtggagaaggcctctgatgat
gttgataactcatttgaatctagacgtgttggtgttgttaaaagccttaatgcaaaagag
cgaacagcttgtgtgaagtggttaaagccagttaccagggcagaagatcctcgtgagttt
gacaaggatgaaattgtaagtgtgtatgagctggagactcatccagattatgattattcc
tatggggatgtagttgttcgattatccccggtttctgtgtctgatcaaaccacctctgat
ttggaaactattggggaatcaaggcagcaaagtggacaaagtgagattatgaatacacaa
aagtgcttaggacgtaagaaaggagaggatgcaccgagtaatgatgtttctatggactcc
tcagatctctcttgggttgggaatatatctggtcttaggaatggtgatctcgaagtcaca
tgggctgatgggatggtttcaatggttggacctcaagcaatttttgtggttggtcgagat
gacgatgatgattcagtttcagctgggagtgaagtaagtgaagctgcagctagttgggaa
acagttgatgatgatgtgagggacactcatgattatactcaagaggcagttgtgctgcaa
gatgcaactggcatgaactcagaggaggaagagagtgtggagaattatagttctggaagg
aatgcagcacgcaattttccactcactgcacttgactttgttgcaagattggccactgga
atattttcacgaggtcagaaaaatatcgacccagatttttcaggctaccaaggtgaaaac
aaactgcattctcagggaacaaactgtatttctgaagaaaaagattccagtgatgagtcc
agtgctgaaaaatctaatgtcaataataactgtggtatgcaaaataccaatggaaaagac
aaacatgtgtctatggaggacccaggatcatcaaatgcagaaaaaacttcatgcaattta
agcaccgaaaagtcaaatgccatgacatgttctgaggctcggattcaccactactttaaa
cattttgacacagctgaagatcctctggaccatcattttcttgattcaaatagactgatc
aaaaatggaaggaagtggcttaagaaggttcaacaagactggaacatcctccaaaacaac
ctgccagacgagatctacgtacgggtttatgaggatcgaatggatctcttaagagcaaca
ataattggggcatatggaacaccttaccaagatgggctattcttttttgactttcacctc
ccaccagagtatcctgatgtccctccttcagcatactaccattctggtggttggcgaata
aatccaaatttgtacgaggaggggaagttgtgccttagccttttaaatacctggactggc
agaggaaatgaagtctggcactcgtgttctagcatccttcaagtcctagtttcacttcaa
gggttggtgctaaattctagaccatattttaatgaagctggatatgataagcagatcggg
acagctgaaggagagaaaaaatcgttgtcatataacgagaatactttcttgctaaactgc
aagacaatgatgtatcttatgcgaaaaccccccaaggattttgaatacttggtaaaggag
catttcaggaggcgtgggtactacattcttaaggcctgtgatgcgtatatgcaaggcaat
ttaattggatctctctctcgagattgctctataagcagtaaggaaagttccaatctaact
tcggttggtttcaagttgatgttagcaaagattgtgccaaagctttacttggcattgaat
gaagttggcgctgattgtcatgaatttaagcatctgctacagtcataa
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