Populus nigra (Lombardy poplar): 133699348
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Entry
133699348 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133699348
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133699348
03036 Chromosome and associated proteins [BR:
pnz03036
]
133699348
Spliceosome [BR:
pnz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
133699348
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
133699348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
Lsm_interact
xRRM
Motif
Other DBs
NCBI-GeneID:
133699348
NCBI-ProteinID:
XP_061978569
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All DBs
Position
7:583447..593923
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AA seq
728 aa
AA seq
DB search
FRPEGFAGVEKIYDRGVFDYLSVSLWCDYLNYIQEHDPSVRECSPDGISKARNLFERALT
AAGLHVAEGNKIWELYREFEQAVLHTIDENDIKAKELQVQRIRNIFHRQLSVPLVNLRST
LLAYKAWEVEQGIDLDARSSEVDGISSHLASAYQKAMEAYNVRAQHEEQISMQNISDTEK
IQNFMNYFKFEKSVGDPARVQVLYERAIADFPISIDLWLDYTRYLDRTLKVGNVLRDVYS
RATKNCPWIGELWVQYMLSLERGRAPEKEISSVFEKSLQCTFSTIEEYLDLFLTRVHGLR
RRIECGGEVNGVLDYSLIRETFQHASDYLSPHLKNTDGLLRLYAYWARLEMNLGKDLVAA
RRVWESLLKISGSTLEAWQGFIAMETESGHISEARSIYKRCFSKRFPGTGSEDICHSWLR
FEEEFGTLEAFDHAIQKVTPRLEELKLYRIQQETKASTDQSEVSGKKIAREKRKGGSTAT
GKESPAKRQKQTAQTQKKGYEDKDQLQKYEVNEAREAKIDLEKTDSAPDEKQMKGSDVVR
TKGYTDQCTVFISNIHFKANSEDIRKFFSDVGGVASIRILHDRNTGKSRGLAYVDFVDDE
HLAAAITKNKQLLFGKRLSIARSDPKQNRRDDRRVPREQAFASDRRRHNWESASKEYVDT
HNASGSQEAPKTATLKSDDNIQFKGKNIFAVPRNVRTLGLSANKSKTVEEGDEKPKSNDE
FRKMFIKE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
ttcaggccagagggtttcgcgggggttgagaagatttatgaccgtggagtgtttgattat
ctgtctgtttctctttggtgtgactatttgaattacatacaagaacatgatccttcagtg
cgagaatgttctcctgatggcatttcaaaggcccggaatctctttgagcgtgctcttact
gctgctggtttgcatgttgctgaaggaaacaaaatttgggaattgtacagggaatttgaa
caggcggtactgcacaccattgatgagaatgacattaaggcaaaggaattacaggtccaa
cgcattcgaaatattttccaccgccaattatctgttccacttgttaacttgaggtcaaca
ctccttgcgtacaaggcttgggaggtggaacaagggattgatcttgatgccagatctagt
gaagttgatggtatatcttctcatcttgcctcagcataccaaaaggccatggaagcttat
aatgttcgtgctcagcatgaagaacagatttctatgcagaatatatctgatacagaaaaa
attcaaaatttcatgaactacttcaaatttgaaaagtctgtgggtgatccagcacgggtt
caagttttatatgagcgtgcaatagctgactttcctatatcaattgatctatggcttgat
tatactcgctatctggacaggaccttgaaggtaggaaatgttctgagggatgtttattcc
agggcaacaaaaaattgtccctggataggagagctttgggttcagtatatgctttccttg
gaacgtggccgtgctcctgaaaaggagatatcttctgtttttgaaaagtccctgcaatgc
actttttcaacaattgaagagtacttggatttgtttctaacacgagtacatggtttgagg
aggaggatcgaatgtggtggtgaagtgaatggtgtcttggattattcattaataagagaa
acttttcagcatgcctcagattacctgtcaccacacctgaagaacacagatggtttgctg
cgtctgtatgcctactgggctcgtctagagatgaatttgggaaaagacttagttgcagct
cgccgagtttgggagagcttgcttaagatcagtggctcaacgttggaagcttggcagggt
tttatagcaatggaaactgaatcgggtcacataagtgaagctaggtccatatacaagcga
tgctttagcaaaagatttcctggaacaggttcagaggacatttgccattcttggttgcga
tttgaagaggagtttggtacactagaagcttttgaccatgctatacagaaggttactcct
cgtctagaagagctgaagttgtataggatacaacaggaaacaaaagcatcaacagatcag
agtgaggtatctgggaagaaaattgctcgtgaaaagagaaagggtggctcaacagctact
ggcaaagagtctccagcaaagcggcaaaaacaaacagcccaaactcaaaagaaggggtat
gaggataaagatcagttgcagaaatatgaagtaaatgaggcccgggaggccaaaattgat
cttgaaaagacagacagcgcccctgatgaaaaacaaatgaaaggttctgacgttgtaaga
acaaaaggctatacagaccagtgcactgtgtttatctctaatatccatttcaaggcaaat
tctgaagatatacggaaattcttcagtgatgttggaggggtggcctctattagaattttg
catgatagaaatactggaaaatcaaggggactggcttatgtggattttgtggacgacgaa
caccttgctgcagctataacaaagaacaaacagctgttatttgggaagaggctgagcatt
gcccggtcagatcccaaacagaaccgaagagatgatcgtagagttcccagggaacaagct
tttgctagtgaccgaagaaggcacaattgggaatctgcatccaaagagtatgtcgataca
cacaatgcatcaggatcacaggaggctcctaagactgctactctcaagtcagatgacaac
atccagttcaaggggaagaacatattcgcagtgccaagaaatgttaggacacttggcttg
tctgcaaacaagtcgaaaacagtggaagaaggagatgagaaaccaaagtcgaatgatgag
ttcagaaaaatgttcattaaagaatga
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