KEGG   Populus nigra (Lombardy poplar): 133699463
Entry
133699463         CDS       T10372                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03420  Nucleotide excision repair
pnz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    133699463
  09124 Replication and repair
   03420 Nucleotide excision repair
    133699463
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pnz04121]
    133699463
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133699463
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133699463
Ubiquitin system [BR:pnz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     133699463
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      133699463
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      133699463
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   133699463
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 133699463
NCBI-ProteinID: XP_061978683
LinkDB
Position
7:complement(8752185..8763836)
AA seq 813 aa
MSLPTKRSATASASTSTASTSASNNFLPMKKAKSQAASACSPLDHNKNGLYHSDDVVFDP
SSMSLDDDLKLVDYRTPPAAANLSRKKATPPQPAKKLVIKLVKAKPTLPTNFEEDTWAKL
QSAIKAIFLKQPAPCDLEKLYQAVNDLCLHKMGGNLYLRIEKECETHISAALQSLVGQSP
DLVVFLKLVEECWHDLCDQMLMIRSIALYLDRTYVKQTPNARSLWDMGLQLFRKHLSLSP
EVEHKTVTGLLQMIERERLGETVNRKPLGHLLKMFTSLGIYAESFERPFLECTSEFYAAE
GMTYMQQSDVPDYLKHVESRLNEEQDRCKIYLDSSTKKPLIATAERQLLERHISAILDKG
FMMLMNGHRIEDLKRIYSLFLRVNGLESLRQALSMYIRRTGQGIVMDEEKDKDMVSSLLE
FKACLDAIWEESFSKNEGFCITIKDAYEYLINLRQNHPAELIAKFLDEKLRAGNKGTSEE
ELEGTLEKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQF
TNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHE
LNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQ
KLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLLKLPKGRDVEDDDSFVFNEGFAAPLYR
IKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFP
IKPADLKKRIESLIDRDYLERDKSNPQIYNYLA
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgtctctccccaccaaacgctcagccacagccagcgccagcactagtacagcgagcact
tccgcctcaaataatttccttccaatgaagaaggccaagtcccaggccgcctccgcctgt
tctcctctcgaccacaacaaaaacggcctctatcactctgacgatgtcgtcttcgatcct
tcttccatgtctctcgacgacgatctcaagctcgtcgactaccgcactcctcccgccgct
gctaatttatctcgcaaaaaagccacccctccacaacccgctaaaaagctcgtaattaag
ctcgtcaaggctaaaccaactctgcctacaaattttgaggaggacacatgggcaaagttg
cagtcagctattaaggctatattcttgaaacaaccagctccttgtgacttggagaagctt
tatcaagctgtcaatgatctttgtctgcataagatggggggaaatctctatctgcgtatt
gaaaaagagtgtgaaacacatatatctgcagcattacaatccttagttggtcaaagcccg
gatttggtggtcttcttaaagcttgttgaggagtgctggcatgatctctgtgaccagatg
ttgatgattcgtagtatagccttgtatctggacagaacatatgtgaaacaaactccaaat
gcacgttcattgtgggacatgggtttgcagcttttccgaaaacatctttctttgtctcct
gaagttgagcacaaaactgtcaccggcctcttgcaaatgattgagagggaaagattaggt
gaaacagttaataggaaaccccttggccatcttttgaagatgttcacttcactaggaatt
tatgcagaaagttttgaaagaccattccttgagtgcacatctgaattttatgctgccgaa
ggcatgacatacatgcagcaatcagatgttccggattacttgaagcatgtggagtcgaga
ttgaatgaagaacaagatcgatgcaagatttaccttgattcaagcactaaaaagccacta
atagcaactgcagaaaggcagctacttgaacgccatatatctgctattcttgataagggg
ttcatgatgcttatgaatggccatcggattgaggaccttaagaggatctactcactgttc
ttaagggtcaatggccttgaatcattaaggcaggcccttagcatgtacatccgaagaacc
gggcagggcattgtcatggatgaagagaaagacaaagatatggtttcctccttgttagag
tttaaggcttgtcttgatgcaatatgggaagaaagcttctccaagaatgaaggattttgc
atcaccataaaggatgcatatgagtatttaattaatcttcgtcagaaccatcctgctgag
ctgatagcaaaatttttggatgagaagcttcgtgctgggaacaagggtacttctgaggag
gagttggagggtacacttgaaaaagttttggttttattcaggtttattcagggtaaggat
gtgtttgaagcattttataagaaggatcttgcaaaaagactgctgttgggaaaaagtgct
tctattgatgcagagaaatctatgatatctaagctgaagactgaatgtggcagccagttt
acaaacaagcttgaaggaatgtttaaggatattgaactgtcaaaggagataaacgagtcc
tttaaacaatcatctcaggccaggactaaacttccatcaggaattgaaatgagtgtacat
gtcttaactactgggtactggcccacatatccacccatggatgtcaggcttcctcatgag
ctgaacgtttatcaggatatattcaaagaattctacttaagcaagtatagtggaagacgc
ttaatgtggcaaaattcattgggtcattgtgtgttgaaagctgagtttccgaaaggtaaa
aaggagctggcagtttctctatttcagactgttgttctgatgctgtttaatgatgcccaa
aagcttagttttcaagatatcaaagactctactggcatagaagacaaggaacttagaagg
actttgcagtctctggcgtgtggaaaagttcgtgtcctgctgaagctgcccaaagggagg
gatgtggaggatgatgattcctttgtgttcaatgaaggatttgctgctccactctatcga
ataaaggtaaatgcgatccagatgaaggaaactgtagaagagaacacaagcaccactgag
agagtatttcaggatcgtcaataccaggttgatgccgcgattgtccggataatgaagaca
aggaaggtgctaagtcacacacttcttataactgaactattccagcagctgaagtttcct
ataaagccagctgatttgaagaaaaggatagaaagccttatcgacagggattaccttgag
cgagacaagagcaatcctcagatatacaattacttggcctaa

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