Populus nigra (Lombardy poplar): 133699682
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Entry
133699682 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133699682
KO
K13091
RNA-binding protein 23/39
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133699682
Spliceosome [BR:
pnz03041
]
Common components
Common spliceosomal components
General mRNP proteins
133699682
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_10
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
133699682
NCBI-ProteinID:
XP_061979030
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All DBs
Position
7:4865512..4873323
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AA seq
603 aa
AA seq
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MEFDEYDYLEKTVENLEPPKAKETANGGDDKVKSREKDRSRSSKHRSDEKDLGNDDEQSR
SKRSRSGDESRDRERSKERSSSRHRSQSRDGERDRHKSSREHRDRDRGRDRDREERNGKE
RDRDRDRRERDRDGEKERERDKEKEIERSRRSRSRSERRRSDQDEKDRERSRDRELREKD
RELREKEREKEREPRERDRESRRYKERKEEAVEPEVDPERDQRTVFAYQISLKADERDVY
EFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEA
EKNLVQSTTAVTSGGLTGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPHDE
SGHCKGFGFVQFARLEDARNALNLNGQVEIAGRPIKVSAVTDQTGTQDGGTNVGDFDDDE
GGGLALNARSRALLMQKLDRTGTASSIAGSLGSPALPTAPILGATPLVSPAVAPLLSGSV
PAIPGLPVPGLQLPATAIPTMDTIGVPSDCLFLKNMFDPKTETEPDFDLDIKEDVQEECS
RFGNVKHIYVDKNSAGFVYMRFENVQAAINAQRALHGRWFAGKLITATFMVPQTYEAKFP
DSR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgatgagtatgactacttagagaaaacagttgaaaatttggaaccgccaaag
gcaaaggaaactgccaatggcggggatgataaggtgaaatctagggaaaaggatcgttca
cggagttcgaagcataggagtgatgagaaggatcttgggaatgatgatgaacaaagtcgt
tcgaagcgatcgagatctggagatgagtccagggatcgtgagcggagtaaagaaaggagt
tcatcccgtcatcggtcacagtctagagatggagagagggatcggcacaagagtagcagg
gaacatcgagatagggacagaggtcgggatagagatagggaggagagaaatgggaaagaa
agggatcgtgatcgtgataggagggaacgtgaccgtgatggtgaaaaggagagggagaga
gataaggagaaggaaatagagcggtcacgccgaagtaggagtagatcggaaaggcgtaga
agtgatcaagatgaaaaggatagagagaggagcagggacagggagcttagagaaaaggac
agggagcttagagaaaaggaaagggagaaggagagggagccaagggaacgagacagagaa
agcagaagatataaagaaagaaaggaagaagcagtggagcctgaggttgatcctgaacga
gatcaaaggacagtatttgcctatcagatatctttaaaggcggatgaaagagatgtctat
gaatttttctctagggctggcaaggtgcgagatgtacgtctcatcatggatcgcaattca
agacgttcaaaaggagttgggtatattgagttctatgatgcgatgtcagtgcctatggcg
atagcactctctggacagctcctccttggtcaaccagtgatggtgaaaccttctgaagct
gaaaagaatcttgttcagtcaactactgctgtgacatcaggtggacttacaggcccctac
tcaggaggggctagaaggttgtatgttggcaacctgcatttcaacataacagaagatcaa
cttcgtcaggtatttgaaccatttggtgctgtggagttggtgcaattgcctcatgatgaa
agcgggcattgcaaaggttttggttttgtccagtttgcacgtcttgaagatgccagaaat
gcattaaacttgaatggacaagttgagattgcaggaaggccaatcaaggtttcagctgtt
actgatcaaactggaacacaagatggtgggacaaatgttggtgattttgatgatgatgaa
ggtggtggcttggccttgaatgcacgttctcgggcacttttgatgcagaaattagatcgt
actggcactgcctcaagtattgctggttcactaggctcccctgctctaccaacagcaccg
atccttggggccacacccttagtgtctcctgctgttgctcctcttttatcaggttctgtt
ccagctatacctggacttccagttccaggccttcaacttccggccactgcaattccaacc
atggatacaattggagtcccaagtgattgtttatttttgaaaaacatgtttgatccaaaa
acagagaccgaaccagattttgatttggatattaaagaagatgtccaagaggaatgctca
aggtttggaaatgtgaagcatatttacgtagacaagaacagtgccggttttgtttacatg
cgatttgagaatgtgcaagctgcaataaatgcacagcgcgctctccatggaagatggttt
gctgggaagttgatcactgcaactttcatggtgccccagacctacgaggctaagtttcct
gacagcagatag
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