Populus nigra (Lombardy poplar): 133699694
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Entry
133699694 CDS
T10372
Name
(RefSeq) vesicle transport v-SNARE 13-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
133699694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133699694
Membrane trafficking [BR:
pnz04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
133699694
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
VMA21
KIAA1549
YwqH-like
PLU-1
Pox_EPC_I2-L1
Exonuc_VII_L
ETRAMP
DUF5713
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
133699694
NCBI-ProteinID:
XP_061979049
LinkDB
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Position
7:12377424..12379635
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AA seq
220 aa
AA seq
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MSNIFEGYERQYCELSSNLSRKCTAALSLDGEKKKQKISEVKAGLEDAEALIRKMDLEAR
NLQPNVKAVLLAKLREYKSDLNNLKTEVKRIGSGNLNSAARDELLEAGMTDALMASGDQR
SRLMMATERLNHSSDRIKDSRRTMLETEELGVSILQDLHQQRQSLLHAHNTLHGVDDNIG
KSKRVLTAISRRMNRNKWMISAIIAVLVVAIILILYFKLK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacatatttgaaggatacgagcgtcaatactgcgaactctcttctaatttatcc
agaaaatgcaccgctgctctttctcttgatggagagaaaaagaagcaaaagatttccgaa
gtaaaagctggattagaggatgctgaagctttgattcggaaaatggatctggaagcgaga
aatttgcagccaaatgtgaaggctgttcttctggctaaattgagggagtacaagtcagat
ttgaacaatctaaaaactgaggttaaaagaattggttctggtaatcttaattcagctgct
cgcgatgagctcttggaagctggaatgactgatgccttgatggcctcaggagatcaaaga
tcaagattgatgatggcgacggaaagactaaatcattccagtgacagaattaaggatagt
agaagaactatgcttgaaacagaagaacttggtgtttcaattcttcaagatttgcatcaa
cagcgacagtctctcttacatgcacataacacgcttcatggagtggatgacaacatcggt
aagagtaagagagtattgactgccatttcgaggaggatgaacaggaacaagtggatgatc
agtgccatcattgctgttcttgttgttgccatcatcttgatcctgtacttcaaactcaaa
tag
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