Populus nigra (Lombardy poplar): 133699771
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Entry
133699771 CDS
T10372
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133699771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133699771
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133699771
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
133699771
NCBI-ProteinID:
XP_061979201
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Position
7:20142482..20149147
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AA seq
585 aa
AA seq
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MGPNPKMKREFLDSTRSSPFPDEVLERVLSLLKSHKDRSAVSLVCKDWYNAESWSRTHVF
IGNCYSVSPEIVARRFPIIKSVTLKGKPRFSDFNLVPENWGADVHPWLVVFATKYPFLEE
LRLKRMAVSDESLEFLAVNFPNFKILSLLSCDGFSTDGLAAIATHCKSLTQLDIQENGID
DKSGGWLSCFPENFTSLEVLNFANLNTDVNFDALERLVSRCKSLKVLKVNKSISLEHLQR
LLVSAPQLTELGTGSFTPELTTRQYAELESAFNQCKSLHTLSGLWEATALYLPVLYPVCS
NLTFLNLSYTFLQSLELASLLRQCPRLRRLWVLDTVGDKGLEAVGSNCPLLEELRVFPAD
PFDEEIIHGVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNP
GQPDYLTNEPMDEAFGAVVRTCTKLQRLSVSGLLTDLTFEYIGQYAKNLETLSVAFAGSS
DRGMQCVLEGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNGCRLLARE
MPRLNVEVMKEDGSDDSQADKVYVYRSVVGPRRDAPPCVLTLSGL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaaatccaaagatgaaaagggaatttcttgactcaacaaggtcatcaccattc
ccagatgaagtactggaacgagttctttcactcttgaaatcacacaaagatcgtagcgca
gtgtctttagtatgcaaggactggtacaacgcagaaagctggtcaagaactcatgttttt
ataggaaactgttattcagtctctcctgaaattgttgcacgtagatttccaataattaag
agtgttactcttaaagggaagccaagattttctgattttaatctagtgcctgaaaactgg
ggagctgatgttcatccttggcttgtagtttttgcaacgaagtatccgtttttggaagag
cttaggcttaagagaatggctgttagtgatgaaagtttggagtttttggctgttaatttt
cctaattttaagattctttctctgttgagctgtgatgggtttagtactgatgggcttgct
gctattgccactcattgcaagagtttgactcagcttgacatacaagagaatggcattgat
gacaagagtggtggttggttaagctgcttccctgaaaacttcacatcattggaagtacta
aactttgccaatctgaatactgatgtcaatttcgatgcacttgagagacttgtaagtagg
tgcaagtcactaaaggttctgaaggtcaacaaaagtatttctttggaacacctacaaagg
ctgttagtttctgctccacaattaacagagcttggcactggttcattcacaccagagctc
acaactcggcagtatgcggagcttgaaagtgcatttaaccagtgcaagagtttacatacc
ctttcaggtttatgggaggcaacagcactatatctaccagttctgtaccctgtctgctca
aacttgactttcttaaacctgagctatacttttctgcaaagtcttgaacttgctagtctt
ctccgtcaatgtccacgacttagacgcctctgggtcctggacactgtgggggacaaaggg
ctggaggctgttggatccaactgtccattgcttgaggagctccgtgtcttccccgctgat
ccctttgatgaggaaattatccacggggtgactgaagcagggtttgttgctgtctcttat
ggatgtcgaagactccactatgttctctacttttgccggcagatgactaatgctgcagta
gcaaccattgtgcagaactgccctgatttcacccactttcgtctttgcataatgaatcca
ggccaaccggattacttgacaaatgaacctatggacgaggcatttggggcagtggtaagg
acttgcactaaactacagaggctttctgtttcaggtctcttgacagacctgacatttgaa
tatattgggcagtatgccaaaaatctggaaactctgtctgtggcttttgcgggcagtagt
gatagggggatgcagtgtgtgctagaaggttgtccaaagttgaggaaacttgagataagg
gactgtccatttggaaatgcagcacttctttcaggtttggagaagtatgagtctatgagg
tcactttggatgtcagcctgcaatgtgacaatgaatggctgtcggttattggcaagggag
atgcccagattgaatgttgaagtaatgaaagaggatggaagtgatgactctcaggctgat
aaagtttatgtttaccgttctgttgtggggccaagaagggatgctccaccttgtgtactc
actctctcaggtttataa
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