Populus nigra (Lombardy poplar): 133699914
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Entry
133699914 CDS
T10372
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133699914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133699914
03110 Chaperones and folding catalysts [BR:
pnz03110
]
133699914
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133699914
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133699914
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
133699914
Messenger RNA biogenesis [BR:
pnz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
133699914
Chaperones and folding catalysts [BR:
pnz03110
]
Heat shock proteins
HSP60 / Chaperonin
133699914
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
133699914
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133699914
Exosomal proteins of other body fluids (saliva and urine)
133699914
Exosomal proteins of breast cancer cells
133699914
Exosomal proteins of colorectal cancer cells
133699914
Exosomal proteins of bladder cancer cells
133699914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
gpW
Motif
Other DBs
NCBI-GeneID:
133699914
NCBI-ProteinID:
XP_061979417
LinkDB
All DBs
Position
7:complement(1864410..1867849)
Genome browser
AA seq
587 aa
AA seq
DB search
MATSNALSRASILCSPKQGGLRRRGNQQNNSRLNYGLSSRRFSVRANAKDIAFDQKSRAA
LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLVEELEKKAR
PVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETMVEVEEGMEID
RGYISPQFVTNPEKLICEFENARVLITDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVTG
EALATLVVNKLRGVLNVAGIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ
LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKIEDA
DERLGADIVQKALLSPASLIAQNAGIEGEVVVEKLKASEWEIGYNAMTDKYENLMEAGVI
DPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPKTPAAAATQGQYAV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatctaatgctctctccagagcttccattctttgctctcctaaacagggaggg
ctgaggaggagaggcaatcagcaaaacaactcaaggctgaattatgggctatcaagcaga
agattttctgtgcgagcaaatgccaaggatattgcatttgatcagaaatccagagctgcc
ctccaatccggaattgataagcttgccgatgctgttggccttactcttggtcctcggggt
agaaatgttgtcttagatgaatttggaagtccaaaggtagttaatgatggggtaacaatt
gcgcgagctattgagctacctgatcccatggaaaatgctggtgcggctctcatcagagag
gtagcaagtaaaactaatgactcggctggtgatggaacaacaactgcatcagttcttgca
cgggaaataatcaaactagggcttttgagtgtcacctctggagcaaatccagtttctata
aaaaggggaattgataaaactgtgcagggcttggtagaagagctagagaagaaggccaga
cctgttaaaggtcgtgatgacattaaagccgttgcgtcaatttctgctggaaatgatgaa
ctcattggcacaatgattgccgatgcaatcgacaaggttgggcctgatggtgttttatca
attgagtcttcatcttcctttgagaccatggttgaagtcgaagaaggaatggagatagat
agaggttacatctctcctcaatttgttacaaatccagagaagttaatttgtgaatttgag
aatgctagagtgttgattactgatcaaaagattactgcaatcaaagacataattcccttg
ctagaaaagactactcaattgagagctcctttgcttataattgctgaggatgtaactggt
gaggctttggctacccttgtggtgaacaagctacgtggtgtactcaatgttgctggtatc
aaggctcctggttttggcgaaaggaggaaagctatgcttcaagatattgccattttaaca
ggagctgaatttcaagctagtgatcttggtttgagcattgaaaacacatcaattgagcag
cttggtttggccaggaaggttacaatcagcaaggattccacaaccatcattgctgatgct
gcatcgaaagatgaattgcaagctaggattgcacaattgaaaaaagagttgtctgagact
gattctgtttatgactcagagaaactggctgaaagaattgccaaattgtctggtggagtt
gctgttatcaaagtgggtgctgcaacggagactgagcttgaggatcgcaaactacgcatt
gaggatgcaaagaatgcaacttttgctgccatagaggaaggaattgtgcctggtggtggt
gctgctttggttcacctctcaacttgtgttccggcaatcaaggacaaaattgaagatgca
gatgagcggttaggtgctgacattgtgcagaaggccctgctatcaccagcatcattgatt
gctcaaaatgctggaattgagggtgaggtggttgtggagaagctaaaggctagtgaatgg
gagattggctataatgccatgacagacaagtatgagaatttgatggaggctggagtcatt
gatccggcaaaggtgacaagatgtgctctgcagaattctgcatctgttgctggaatggtc
ttgaccacccaggccattgttgtagaaaagcccaagcccaagacacctgcagctgctgct
acacaaggccaatatgctgtgtaa
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