KEGG   Populus nigra (Lombardy poplar): 133699917
Entry
133699917         CDS       T10372                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03030  DNA replication
pnz03410  Base excision repair
pnz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    133699917
   03410 Base excision repair
    133699917
   03420 Nucleotide excision repair
    133699917
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pnz03032]
    133699917
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133699917
Enzymes [BR:pnz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     133699917
DNA replication proteins [BR:pnz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    133699917
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      133699917
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 133699917
NCBI-ProteinID: XP_061979420
LinkDB
Position
7:3997345..4022095
AA seq 2221 aa
MNGESRRWDRKDLRRSSKKQKLMRTAEEELESKLGFDLFTEGDKRLGWLLTFSSSSLDDE
ETGRVYSCVDLYFVSQDGSAFKSKYKFRPYFYAATKEKMEMDVEGYLRRRYESQIADIEI
VEKEDLDLKNHLSGLHKSYLKISFATVQQLMDVKRDLLHVVERNQAKSDAAEAYESILTG
KREQRPQDFLDCIIDLREYDVPYHVRFAIDNDIRCGQWYDVSVSSTGVMLEKRTDLLQRA
EVHVCAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLITNRECVGEDIEDLEYTPKPE
YEGCFKVTNVKNEVELLKQWFAHMREVKPGIYVTYNGDYFDWPFLESRAAYHGFKMSDEV
GFSCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR
FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM
VQAYMANVICPNKHQSDQEKFYKSHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAY
ELLIKNLDRDLQYAIRVEGKMDLDSISNYDEVKNAIMEKLVCLRDEPVREECPLIYHLDV
AAMYPNIILTNRLQPPSIVTDEICTACDFNRPDKTCLRKLEWVWRGEIFMAKKSDYYHLK
KQIESEFVDGTDGQFSKSFLDLSKMDQQSKLKERLKKYCQKAYKRVLDKPVTEVREAGIC
MRENSFYVDTVRSFRDRRYEYKGLNKVWKGKFSEAKASGNSIKIQEAHDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVDKIGKPLELDTDGIWCV
LPGCFPENFTFKTKDSKKKLTISYPCVMLNVDVARNNTNEQYQTLVDPVRKTYATHSECS
IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
LFDKFLHGSTLEECYSAVAAVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLSDYGA
QKSCAVTTARRLADFLGDTMVKDKGLRCQYIVACEPRGTPVSERAVPVAIFETDPEIMKF
YLRKWCKTSSDVGIRSIIDWSYYKQRLSSAIQKIVTIPAAMQKVANPVPRVVHPDWLHRK
VREKEDKFRQRKLVDIFNLRGRDDLSRKMDDATITNHDEANVKDLEDFQIKSSSINRPRP
IVRCYDVNEKRSAKKTGQLNFAEQQTDSVHELSSQPEHNTSYAENIDRNVDYQGWLELKK
RKWKDILDRRKKQRLSNTRTSYHITDASEMLGGLTNHKGAQRRTGVGSYFTTHEVALTRC
YWQIIQLLPSSRCGQFFAWVVVEGIMLKIPITIPRAFYLNSKAPAMENFPGRRVTKTLPH
GRPSYNLVEVIIDEDKFRKESKKLAALLADPEVEGIYESKVPLEFNAVIQIGCVCKVDKT
AKKRNAQDGWSLSELHMKTTTECSYLEQSISFFYIYHSISEGRAIYVIYLPALGTVSVVV
VNPYQNKDITPSFLERQFREACQALSIEAIPPRNSIVFKVDYVGHVKDAEKILQGTISEL
RDQHHGPTLAVIECPNAHLMKSGVPALEDFPCVSIPSNARDSQYQVLGWQQASAKIGMQR
SAASSQWLNERISLSRYAHVPLGNFELDWLIFTADVFFSRALHDQQQVLWISDDGVPDLG
GNHEESTCFADEVQQPVLTYPGAYRKVSVELKIHHLAVDALLKSNQINEMEGGALLGFDQ
DMNSSTTLYDQSGFDEATSSASGLRVLKQLIQRCLADAVTSGNVFADAILQHLYRWLCSP
QSKLHDPALHRILHKVMQKVFALLLAELRKLGATIIFANFSKVIIDTGKFELTAAKAYCD
SVLKTLQNRELFEWIELEPLQFWHSLLFMDQYNYGGIPARPDDSSHNGLHHHSPREEPKV
DIVSNWNIAEYLPKKIQDHFVLIVSEFMFIPWDYAQKQAATREALRDGNSCTPSITIVAA
ENFESHMVEYIKGQIGTHFTDKLLGIARDTVLHMKGINKSENDQQISLGIQQPAGMNHKG
DPALEFIKHVCAVLALDQHVQHEVLVMRKNLLKYVRVREFAPEAEFHDPCPSFILPNVIC
SYCNDCRDLDLCRDSAVLAEEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVC
LRCNQVKAAHLSEQCSCAGSFRCREDVSEFRRKMQIFLNVAIRQKFLLLQECTSWILEVI
L
NT seq 6666 nt   +upstreamnt  +downstreamnt
atgaacggcgagagccggagatgggaccgcaaggacctacggcggagctcgaagaagcaa
aagctgatgcgcaccgccgaagaagagttggagtccaagctcggctttgatctcttcacc
gaaggtgataaacgtctcggttggctcctcactttctcttcctcttctttggatgatgag
gagaccggtagagtctatagttgcgtcgatctctacttcgtttctcaggatggttcggct
ttcaagtcgaagtacaagttccgtccttacttctatgcggctacgaaggagaaaatggaa
atggacgtggagggctatttgcgacggcgatatgaaagtcaaattgctgatattgagatt
gtagagaaggaggatttagatcttaaaaaccatttgtctggtttacacaaatcatattta
aaaatatcttttgctaccgtacaacaattaatggatgtcaagagagatctgttgcatgtt
gttgaaagaaatcaggcaaagtctgatgcagcagaagcatacgagtccatattaacagga
aaaagggaacaaagacctcaggattttcttgattgcatcattgaccttcgggagtatgat
gtcccataccatgttcgctttgccattgataatgatatacgttgtggccagtggtatgat
gttagtgtctctagtactggtgtcatgcttgagaagaggacagatcttctgcaacgtgct
gaggttcatgtttgcgcatttgatattgaaacaaccaagcttcctttgaaatttccagat
gctgaatatgatttgataatgatgatatcatacatggttgatggacaaggttatctgatt
accaacagagagtgcgtgggggaagatattgaggatttagaatatacaccaaaacccgaa
tatgaaggttgtttcaaagtgacaaatgtgaaaaatgaggttgagcttcttaaacagtgg
tttgcccacatgcgagaggtgaagcctggtatttatgttacatacaatggtgattatttt
gattggcccttcctggaaagcagagcagcttatcacgggttcaagatgagtgatgaggtt
ggattctcatgtgacaagaatcaaggggagtgccgtgctaaatttgcttgccatttggat
tgttttgcttgggtcaaacgtgatagttatttgcctcagggaagccaaggccttaaggca
gttacaaaggcaaagttgggttatgatccacttgaggtgaatccagaggacatggttcgc
tttgctaaagaaaagcctcagatgatggcctcctattcggtttctgatgctgttgcaact
tattatttgtacatgacctatgtgcatcccttcattttctctctcgcaacaataattcct
atgtcaccagatgaggtcttacgcaaaggtagtgggacactttgtgaaatgcttctgatg
gtgcaggcgtatatggcaaatgttatctgccctaacaagcaccaatctgaccaagagaag
ttctataagagtcaccttcttgagagcgagacatatatagggggtcatgtggagtgcctt
gaaagtggtgttttcagatctgatcttccaaccagttttaagcttgatccttctgcctat
gaactacttatcaaaaaccttgatcgagatctgcaatatgctataagagtagagggtaag
atggacctggattcaatctccaattatgatgaagtgaagaatgctatcatggaaaagctt
gtgtgtttgagagatgaacctgttcgtgaagaatgtccacttatttatcatcttgatgtg
gctgcaatgtatccaaacattatcttaacaaacaggcttcagcccccatctatagttaca
gacgagatctgtactgcttgtgacttcaaccgcccagacaaaacttgtctacggaagctt
gaatgggtttggcgtggagagatatttatggcaaagaaaagtgactattatcatttgaag
aagcagattgagtccgagtttgttgatggcactgatggtcagttttcaaagtcttttctt
gatctgtccaagatggaccaacaatcaaagctgaaagagcgtcttaagaaatactgtcag
aaggcatataaacgggtactcgacaaacctgttactgaagttcgagaagctgggatctgc
atgcgggaaaactcattttatgtagacactgttcgtagctttcgagatagaaggtatgaa
tataaagggcttaataaggtttggaaggggaagttttcagaagccaaggccagtggaaat
tctattaagatacaagaagcacatgacatggtagtgctttatgattcgttgcaacttgct
cacaaatgtattctgaattcattctatggatatgtcatgcgcaagggtgcaagatggtat
tcaatggaaatggctggtgtagttacatatacaggagcaaaaatcattcagaatgctcgt
ttgcttgttgataaaattggaaagccacttgaattggacacagatggtatttggtgtgtc
ctccctggatgttttccagagaactttacttttaaaacaaaggactcaaagaaaaagctg
acaatctcgtatccatgtgttatgctcaatgtcgatgtggcaagaaacaacacaaatgaa
caataccagacactcgtagaccctgtacgtaaaacatatgcaactcatagtgaatgctca
attgaatttgaagtggatggcccatacaaggcaatgattcttcctgcttccaaggaagaa
ggaattttaattaagaagcgatatgctgttttcaatgatgatggaacccttgcagagctt
aaaggttttgagatcaagcgtcgaggtgagctgaagctcatcaaagttttccaggctgag
cttttcgacaagttcctccatgggtcaaccttagaggaatgctactcagctgtagctgct
gtggcaaaccgctggctggatcttcttgataatcaaggaaaggatattgctgacagcgag
ttgcttgattacatatctgaatcaagcacaatgagcaagtccttgtccgactatggtgca
caaaagtcatgtgcagtaactactgctaggcgtcttgctgattttcttggtgatacaatg
gttaaagataaaggattgcgttgccagtatatagttgcatgtgaaccaaggggaacacct
gttagtgagcgtgctgttcctgttgcaatattcgaaactgatcccgaaataatgaagttc
tatttacgaaaatggtgcaagacttcttcagatgttggtatccgctccatcattgactgg
tcttattacaagcaacgacttagttcagcaattcaaaaaattgttacaattcctgctgca
atgcaaaaggttgcgaaccctgttcctagggtagttcatcctgattggctgcacagaaaa
gttcgtgagaaggaggacaaatttcgtcaacggaaattggttgatatcttcaacttacgc
ggcagggatgatctctccagaaagatggatgatgccaccatcacaaatcatgatgaggcg
aatgttaaagatttggaagacttccaaatcaaaagcagttctataaataggcctagacca
attgttcgttgttatgatgtcaatgaaaaacgttcagcaaagaaaactggccaattgaat
tttgcagaacagcaaactgatagtgtgcatgaattgtcttcacagccggaacacaatact
tcctatgctgaaaatattgacagaaatgtagattatcaaggatggcttgaattaaagaag
agaaaatggaaagatattttagacaggaggaagaaacaaaggttgagcaatacaaggact
tcataccatattactgatgcatctgaaatgctgggtggtctaaccaatcataaaggagct
cagcgcagaactggagttggttcatattttactacacatgaagtagccctaacacgatgc
tactggcagataatacagctacttccaagttcacgttgtggccaattttttgcatgggtt
gttgtggagggaatcatgcttaagattcctataactattccacgagcattttacctcaac
tctaaagcacctgcgatggaaaattttcctggtaggcgtgtcactaaaacgcttcctcat
ggaaggccgagctataacctggttgaggtcattatagatgaagacaagtttaggaaggaa
agcaagaaactagcagctcttcttgcagacccagaagttgaggggatatatgaatcaaag
gtgccattggagtttaatgcagtaatccaaattggttgtgtctgtaaagtggataaaact
gctaaaaaacgaaatgcccaggatggctggagtctgagtgagctgcatatgaagactaca
acagaatgttcctatttggagcaatcaatatctttcttttacatatatcatagcatctct
gaaggacgtgctatatatgtcatttatttgcctgcattggggacggtatctgttgtggtt
gttaatccttaccaaaataaggatataacaccatcttttcttgaaagacaatttcgggaa
gcttgccaagcattgtcaattgaagcaatacctcctaggaatagtattgttttcaaggtg
gactatgttggacatgtcaaggatgctgaaaagattttacaaggaacaattagtgaactc
agagaccagcatcatggacctacacttgctgtcattgaatgcccaaatgcacacttgatg
aagtcaggtgtaccagctcttgaagatttcccttgtgtgagcataccttcgaatgctcgt
gatagtcagtatcaggtacttgggtggcaacaagcatctgcaaaaattggcatgcaacgt
tctgctgcatcatctcagtggttgaatgaaagaatttctctctcaagatatgcccatgta
cccttgggaaattttgaacttgactggcttatattcacggcagatgtcttcttttcaaga
gcattacatgatcaacaacaggtgctttggatatctgatgatggtgttccagatttagga
ggtaatcatgaagaatctacatgttttgctgatgaggtccaacaacctgttctaacatac
cctggagcatataggaaagtttctgtcgaattaaagatacatcacctggctgtagatgct
cttctgaaaagtaaccaaataaatgaaatggaaggaggtgctttgttaggattcgaccag
gacatgaattccagtacaactctatatgatcagagcggctttgacgaggctacctcatct
gcatctggattgcgtgtcctgaaacagctgatccagaggtgccttgcagatgcagttaca
tcaggaaatgtttttgctgatgcaattttacaacatctgtatcgttggctttgcagccct
caatcaaagcttcatgatccagctcttcaccgcatactccacaaggtcatgcaaaaggtt
tttgctttgctgttggctgaattacgcaaattaggtgccacaatcatatttgccaatttt
tcgaaggttatcatagacacaggaaaattcgaattaaccgctgccaaagcttactgtgac
agcgtgctcaaaactttgcaaaatagagaactgttcgagtggattgagcttgaaccattg
cagttttggcattccttgctctttatggatcagtataactacggtggcattccagccaga
cctgatgacagttctcacaatggtttgcatcatcactctccaagagaagaaccaaaagtg
gatattgtgtcaaactggaatattgctgaatacctgcccaagaaaatccaggatcatttc
gttttaattgtctcagaattcatgtttattccctgggactatgcacaaaagcaagctgca
acaagagaagctttgcgtgatggaaactcatgtactccatcaatcaccattgtagctgct
gagaattttgaatcacacatggtggaatatattaaagggcagatcggcacacacttcact
gacaaacttctaggaattgctcgagatactgttcttcacatgaaggggataaacaaatct
gagaatgaccaacagatttcactcggtatccagcaacctgcgggcatgaaccacaaaggg
gatcctgcactggaattcattaagcatgtttgtgctgtcctggctcttgaccagcacgtg
cagcatgaagttctggtgatgagaaagaatctgttaaaatatgtacgtgttcgggagttt
gctccagaagctgagtttcatgatccctgtccttcctttatcttaccaaatgtaatttgc
agttactgcaatgactgcagagacctggacttgtgtcgtgactcagctgtattggcagag
gagtggcgctgtgccgtgccacagtgtggccagccttatgaccgagaagtaatggagaat
gctcttcttcaaattgtacgacagagggagcgtctttatcatttgcaggatctggtatgt
cttaggtgcaatcaggtcaaagctgctcatttatcagaacagtgttcatgtgctggatcg
tttaggtgcagggaagatgtgtctgaatttcgcagaaaaatgcaaattttcttgaatgta
gccattcgtcagaagtttctactcctccaggagtgtacctcttggattttagaagtcatc
ttataa

DBGET integrated database retrieval system