KEGG   Populus nigra (Lombardy poplar): 133700227
Entry
133700227         CDS       T10372                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133700227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133700227
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133700227
Membrane trafficking [BR:pnz04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    133700227
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133700227
  Exosomal proteins of other body fluids (saliva and urine)
   133700227
  Exosomal proteins of colorectal cancer cells
   133700227
  Exosomal proteins of bladder cancer cells
   133700227
SSDB
Motif
Pfam: VPS28 GDH_C NUP160_helical
Other DBs
NCBI-GeneID: 133700227
NCBI-ProteinID: XP_061979757
LinkDB
Position
7:19995479..19997396
AA seq 209 aa
MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYEMECQKLIAHFKTLA
SSLKDTVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAAVSSTTSASIVAECVQN
FITAMDSLKLNMVAVDQVHPLLSDLSASLNKLSILPPDFEGKTKMKEWILRLSKMGAADE
LTEQQARQLHFDLESSYNSFMAALPSAGT
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaggtcaagctatggaatgacaagcgcgagagagaaatgtatgagaattttgccgag
ctatatgcaataataaaagccacggagaagcttgaaaaggcatatgttcgtgacattata
tcctcatctgagtatgaaatggagtgccagaaactcattgcccatttcaaaactttggct
tcctctctgaaagacacagtccctagcatcgagcgctttgcagatacatacaagatggac
tgcccagctgccatcaaccggcttgtgacctccggggtgcctgccacagtggaacaccgt
gctgctgctgctgtgtcgtctactacctcagcttccattgtggctgagtgtgtccagaac
ttcatcacagctatggattcgctgaagttgaatatggtggctgtggaccaggtgcatcct
ttgctttcagacctctcagcctcactgaacaagctgagtattttgccacctgactttgag
gggaagacaaagatgaaagaatggattttgaggctgtctaagatgggggctgcagatgaa
ctgacagagcagcaggcccggcaacttcattttgatctggagtcctcatacaattcattt
atggcagctttgcctagtgctggtacttga

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