Populus nigra (Lombardy poplar): 133700379
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Entry
133700379 CDS
T10372
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133700379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133700379
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133700379
Membrane trafficking [BR:
pnz04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
133700379
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
133700379
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133700379
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank
Ank_5
Ank_3
PH
BAR
Ank_4
PH_11
ANK_LRRK2
PH_8
PH_20
BAR_2
DUF6760
PH_13
TPR_21
Motif
Other DBs
NCBI-GeneID:
133700379
NCBI-ProteinID:
XP_061979870
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All DBs
Position
8:17517253..17526333
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AA seq
830 aa
AA seq
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MHFTKLDDSPMFRKQIQSLEEDAESLRERSLKFYKGCRKYTEGLGEAYDGDVGFASALET
FGGGHNDPISLAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLHFVNIDLLEVKE
ARKRFDKASLLYDQAREKFLSLRKGTRSDVAILLEEELHNARAVFEQARFNLVTAISNVE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYIHQVLTYAQQSRERSNYEQASLNER
MQEYKRQIDRESRWSSNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLS
KRSSSLRGDWKRRFFVLDSRGMLYYYRKQSSKPSGSGGQLSGQRNSSELGSGLLSRWLSS
HYHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWI
EKITGVIASLLSSQAPERCLSASPLGSGHHRSASESSSFESTDFDPSAVDEYASERSHAA
LHHERAFRSSQQQRTSAEKPIDVLQRVCGNDKCADCGAPEPDWASLNLGVLICIECSGVH
RNLGVHISKVRSLTLDVKVWEPSVIRLFQSLGNAFANSVWEELLQSRSALQVELIPTGSF
KSDKPQLLFIGKPNPADSISVKEKFIHAKYAEKVFVRKPRDKQNSQSVAQQIWEAVRAND
KKAVYRLIVHHEADVSAVYEQASCSSSLTLAKAMLLQEQTNPEQLSSYSTGNSLDRSSTS
SLNFAGSSEGLTLEDLDGCTLLHLACETADIGMLELLLQYGANINSTDSRGQTPLHRCIL
RGGPFLAKLLLSRGADPRAVNGEGKTPLELAIESGFDESEVLALLSDSNG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcacaaagctcgatgactctcctatgtttcgaaagcagatacaatcactggaa
gaagatgctgaatcattgagggagagaagtttaaagttctacaaaggatgtagaaaatac
actgaagggctgggggaggcatatgatggggacgttggttttgctagtgctttagaaaca
tttggcggagggcataacgatcctattagcttggcttttggaggccctgttatgaccaaa
ttcaccatagccttgagagaaattgggacatacaaagaagttctccgatcccaggttgaa
catatgctgaatgacagattattacactttgtcaacattgatttgcttgaggtgaaggaa
gcaaggaagcgttttgacaaggctagccttctttacgaccaggctcgtgagaagtttctg
tcactgaggaaaggcacgaggtctgatgtggctattcttttagaggaggagcttcataat
gcaagggctgtgtttgagcaagctcgcttcaatctagtaactgctatttctaatgtcgaa
gctaagaagaggtttgaatttttggaagcagtcagtgggacaatggatgcacatcttcgt
tacttcaaacagggctatgagcttttgcatcaaatggagccatacattcatcaggttttg
acttatgctcaacaatcaagggaaagatctaactatgagcaggcatctctcaatgaaagg
atgcaagagtacaagagacaaattgatcgtgagagtagatggtcttccaatggttctaat
ggatctccaaatggagacggtatacaagccattggtagaagttcacacaaaatgatagag
gctgttatgcaatccgctgcaaaggggaaggttcaaactatcagacaaggttatctgtca
aaacgatcctcaagcttgagaggtgactggaaaagaagattttttgttcttgatagccga
ggaatgctttattactatcgtaaacagagcagcaaaccttcaggttctggcggtcaactt
tctggtcaaaggaacagctctgagcttggatctggattgttaagtcgatggctttcttct
cactatcatggtggagtgcatgatgaaaagtctgttgctcatcacaccgtgaaccttctt
acatcaacaatcaaagtcgatgctgaccagtcagatctgcgattttgcttcaggatcatc
tcaccaacgaagaactacacattgcaggcagagagtgcactggatcaaatggattggatt
gaaaagataacaggggttattgcttcactactaagctcacaagctcctgagaggtgtctc
tcggctagtcccctgggaagtggtcatcatcggtctgccagtgagagtagttcatttgaa
agtactgattttgatccttctgctgttgatgaatatgcatctgagaggagccatgccgcc
ttacatcatgaacgagcattcagaagttcgcaacagcaacgaaccagtgcagagaagcca
attgatgtgttgcaaagagtttgtggaaatgataaatgtgctgattgcggcgcccctgag
ccagattgggcatctctaaatcttggagttcttatttgcattgaatgttctggtgttcac
cgtaatcttggtgtacatatatcaaaggtaaggtcacttacactcgatgtcaaggtgtgg
gagccatcagtcataagattgttccagtctctgggaaatgcctttgctaactcagtctgg
gaggaattattgcaatcaagaagtgccttgcaggttgaactcatccccacaggctcgttc
aagtccgataaaccacagctgctctttatcggcaaacccaatcctgccgattctatctct
gtaaaggagaagtttatccatgcaaagtatgcggaaaaggtatttgttcgcaagcctaga
gacaaacaaaatagtcaatcagtggcccaacagatctgggaagctgttcgtgccaatgac
aagaaggctgtataccgtcttattgttcatcatgaagcagatgtcagtgctgtgtatgag
caagcatcttgcagctcttccctaacacttgctaaagcgatgctattgcaagagcagaca
aaccctgaacaactctctagctactcaacgggcaattcattggataggtcttccactagc
tctttaaactttgcagggtcaagtgaaggcctgaccttggaggatctagatggttgtacc
ttgcttcaccttgcttgtgaaacagccgacattggcatgctagaactcctcttacagtac
ggtgcgaatataaattcaaccgattctagaggtcagacaccgctccaccgttgtattctc
agaggcggacctttccttgcaaaattgctcctctcaaggggagcagatccacgagctgtt
aatggtgaaggtaaaaccccgcttgagcttgccatagagtccggctttgatgagagtgag
gtccttgcattattatcagactcaaatggttga
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