Populus nigra (Lombardy poplar): 133700386
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Entry
133700386 CDS
T10372
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133700386
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133700386
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133700386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-C3H2C3
zf_RING_Vps8
zf-ANAPC11
Metal_CEHH
RINGv
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
133700386
NCBI-ProteinID:
XP_061979880
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All DBs
Position
8:complement(20561161..20565332)
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AA seq
249 aa
AA seq
DB search
MNWNTLMDGHYMNASYPYNSAGSFIEYFEGLTYDHVNFIFNGASHVQDSVYPSMNANFYK
FGLSPPGSASYYDPAYVYEVHNHGLRNEEYRRPPLENSSTATNERTSRVNTEWEVNENRS
SHDDPVECLRRHHNVQDYQAIWQDHVDPDNMTYEELLELGETVGTQNRGLSQEQISLLPT
SKYKRSFFSRRKSRSERCVICQMEYKRGDRQITLPCKHIYHAGCGTRWLSINKACPICYS
EVFGDASKH
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaatacactcatggatggtcattacatgaatgctagctacccatataattca
gctggaagttttattgaatatttcgaaggtctcacgtatgaccatgtgaatttcattttc
aatggagcttcccatgttcaggatagtgtatacccctcgatgaatgcaaatttctacaag
tttggcttatccccaccagggagcgcttcatattatgaccctgcttatgtctatgaggtc
cacaatcatggactacgaaatgaagaatatagaaggccgcccttggagaattcttctaca
gcgactaatgaacggacttctagagtaaatactgaatgggaagtaaatgaaaacaggtct
tctcatgatgaccctgtagaatgtttgcgcagacatcataatgttcaggattatcaggct
atttggcaagaccatgttgatcctgacaatatgacttacgaggaattacttgaattaggc
gagacagttggaactcaaaatcgaggtctttctcaagaacaaatttctctgcttccaacc
tcaaaatacaagcgcagcttcttctcaaggaggaaatcaagaagtgagaggtgtgtcatt
tgccaaatggaatataagcgaggtgatcgtcagatcactctaccatgcaaacatatttac
catgctggttgcgggaccagatggcttagcatcaataaggcctgccccatctgctactca
gaggtttttggtgatgcatcaaaacattaa
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integrated database retrieval system
