Populus nigra (Lombardy poplar): 133700464
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Entry
133700464 CDS
T10372
Name
(RefSeq) autophagy-related protein 3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133700464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133700464
04121 Ubiquitin system [BR:
pnz04121
]
133700464
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133700464
Membrane trafficking [BR:
pnz04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
133700464
Ubiquitin system [BR:
pnz04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
133700464
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133700464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
133700464
NCBI-ProteinID:
XP_061980019
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Position
1:39467892..39472748
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AA seq
315 aa
AA seq
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MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPS
KRKSYLPAEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKETKG
DEDENVPSMEALEISAKKSLIQTNPSYFGGEEEEDIPDMADFEDPDNLIESDPATLQTTY
LVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARK
TVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPTI
EYDYTMDFDLGSSSS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggtgctatcacagaagattcacgaagcattcaaaggaacagtagagagaatcacaggt
ccacgcactgtttctgccttcaaagagaaaggcgttcttagtgtcagcgaattcattctc
gctggtgacaatctcgtctctaaatgccccacttggtcctgggaatctggagagccgagc
aagaggaagtcatacttacctgcagagaaacagtttttgatcactcgaaacgttccttgt
ctacgaagagctgcatctgtagaagaagagtatgaagcggctggaggtgaagttctactt
gataacgaagataatgatggatggctggcaactcacgggaaacctaaagaaaccaaaggt
gatgaggatgagaatgtgccttcaatggaggctctagaaatcagtgcaaaaaaaagtctt
atccaaacaaacccttcatacttcgggggagaggaggaggaagatattcctgacatggca
gattttgaagaccctgacaatctgattgaatcagatcctgcaacacttcagactacatac
ctcgtggctcatgagcccgatgatgataacattctgcgcacccgaacatatgatgtcagc
atcacgtatgataaatattatcaaactcctcgtgtatggcttactggatatgatgagtca
aggatgcttttgcaaccagagcttgtacttgaagatgttagccaagaccatgcacgcaaa
acggtgactattgaagaccatccccacttacctgggaagcatgcatcagtgcatccttgc
agacatggggctgtcatgaagaaaattattgatgttttaatgtcacgtggagttgagcca
gaagttgacaagtaccttttcttatttttgaaatttgtagcctctgtaattccaactatt
gaatatgattacaccatggattttgatctcggtagctcaagcagctga
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integrated database retrieval system