KEGG   Populus nigra (Lombardy poplar): 133700464
Entry
133700464         CDS       T10372                                 
Name
(RefSeq) autophagy-related protein 3
  KO
K08343  ubiquitin-like-conjugating enzyme ATG3
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    133700464
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133700464
   04121 Ubiquitin system [BR:pnz04121]
    133700464
   03029 Mitochondrial biogenesis [BR:pnz03029]
    133700464
Membrane trafficking [BR:pnz04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    133700464
Ubiquitin system [BR:pnz04121]
 Ubiquitin-conjugating enzymes (E2)
  UBL-conjugating enzymes
   133700464
Mitochondrial biogenesis [BR:pnz03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    133700464
SSDB
Motif
Pfam: Autophagy_act_C
Other DBs
NCBI-GeneID: 133700464
NCBI-ProteinID: XP_061980019
LinkDB
Position
1:39467892..39472748
AA seq 315 aa
MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPS
KRKSYLPAEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKETKG
DEDENVPSMEALEISAKKSLIQTNPSYFGGEEEEDIPDMADFEDPDNLIESDPATLQTTY
LVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARK
TVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPTI
EYDYTMDFDLGSSSS
NT seq 948 nt   +upstreamnt  +downstreamnt
atggtgctatcacagaagattcacgaagcattcaaaggaacagtagagagaatcacaggt
ccacgcactgtttctgccttcaaagagaaaggcgttcttagtgtcagcgaattcattctc
gctggtgacaatctcgtctctaaatgccccacttggtcctgggaatctggagagccgagc
aagaggaagtcatacttacctgcagagaaacagtttttgatcactcgaaacgttccttgt
ctacgaagagctgcatctgtagaagaagagtatgaagcggctggaggtgaagttctactt
gataacgaagataatgatggatggctggcaactcacgggaaacctaaagaaaccaaaggt
gatgaggatgagaatgtgccttcaatggaggctctagaaatcagtgcaaaaaaaagtctt
atccaaacaaacccttcatacttcgggggagaggaggaggaagatattcctgacatggca
gattttgaagaccctgacaatctgattgaatcagatcctgcaacacttcagactacatac
ctcgtggctcatgagcccgatgatgataacattctgcgcacccgaacatatgatgtcagc
atcacgtatgataaatattatcaaactcctcgtgtatggcttactggatatgatgagtca
aggatgcttttgcaaccagagcttgtacttgaagatgttagccaagaccatgcacgcaaa
acggtgactattgaagaccatccccacttacctgggaagcatgcatcagtgcatccttgc
agacatggggctgtcatgaagaaaattattgatgttttaatgtcacgtggagttgagcca
gaagttgacaagtaccttttcttatttttgaaatttgtagcctctgtaattccaactatt
gaatatgattacaccatggattttgatctcggtagctcaagcagctga

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