Populus nigra (Lombardy poplar): 133700568
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Entry
133700568 CDS
T10372
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133700568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133700568
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133700568
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133700568
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
FAIM1
zf-Di19
Motif
Other DBs
NCBI-GeneID:
133700568
NCBI-ProteinID:
XP_061980120
LinkDB
All DBs
Position
8:complement(20196784..20201072)
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AA seq
305 aa
AA seq
DB search
MASSNLFFDDIRNKPEVIDPPQNEDLTDIGESVNDPAQTALKPNVTVSSSVRELLECPVC
LNAMYPPIHQCSNGHTLCSGCKPRVQNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF
GCIGIYPYYSKLKHESQCVFRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN
HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS
YSLEVGGGGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR
IWKEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagcaatctgttttttgatgacatccgaaataaacctgaggttattgatcct
cctcaaaatgaagacttgacggatattggtgaaagtgtaaatgatcctgctcagacagct
ctaaaacctaacgtgactgtgtctagcagtgttcgtgaattactggagtgtcctgtgtgc
ttaaatgccatgtatcctccaattcaccagtgttcaaatggccacacattatgttctggt
tgcaagcccagggttcaaaaccgatgccccacttgcaggcacgaacttggcaacattagg
tgtcttgcgctagagaaagttgctgcatctcttgaacttccatgtaaatatcagagtttt
gggtgcataggcatatacccttattacagcaagctaaaacatgaatcccaatgtgttttt
agaccatataactgcccatatgctggatcagaatgcacagttattggtgatattccttat
ctggtggcccatttgaaagatgatcacaaagttgacatgcataatggcagtactttcaat
cacagatatgtcaaatcaaatccacacgaagttgagaatgcaacatggatgctgacggtc
tttagctgctttggtcagtatttttgtctacattttgaagcattccagcttgggatggcc
ccggtctacatagcattcctacggtttatgggggatgacaatgaggcaaagaactatagt
tacagtcttgaagtgggtggtggtgggaggaagatgatatggcaaggggtaccaaggagc
ataagggacagccaccgaaaggttcgagacagttttgatggtctgatcattcaacgcaac
atggcccttttcttctctggtggggataggaaggaattgaagcttagggtgactggtcga
atttggaaagaacagtga
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