Populus nigra (Lombardy poplar): 133700682
Help
Entry
133700682 CDS
T10372
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03420
Nucleotide excision repair
pnz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133700682
09124 Replication and repair
03420 Nucleotide excision repair
133700682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pnz03051
]
133700682
03400 DNA repair and recombination proteins [BR:
pnz03400
]
133700682
Proteasome [BR:
pnz03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
133700682
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
133700682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
UBA_3
TECR_N
CUE
Dsc3_N
MmeI_C
Med13_C
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
133700682
NCBI-ProteinID:
XP_061980277
LinkDB
All DBs
Position
8:complement(19335160..19340501)
Genome browser
AA seq
372 aa
AA seq
DB search
MKLTVKTLKGSHFEIKVHPTDTIMGVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVTEDGFLVVMLSKSKTGTAGTSSTQPVSTPPTTTPTSISTPAPDAQALDSKSASASD
SATANAQSDTYGQAASNLVAGSNLEQTLQQIMDMGGGTWDKETVTRALRAAYNNPERAVD
YLYSGIPETAEVAVPVARFPADQATETGAAPAAPAPAFGAPNSSPLNMFPETISGGGGGA
GGGLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRIIQEHHAEFLQLIN
EPLDGSEGDIFDQPDQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEQLAA
NYLLENAGDFED
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtcaagactctgaaaggcagccatttcgaaattaaggttcatcccacc
gacactattatgggtgtcaagaagaatattgaagatgcgcaaggaaaagacaattaccca
tgtggacaacaattgttgattcataatgggaaagtattgaaagatgagactactttagct
gataacaaggttactgaagatggttttcttgttgtcatgcttagcaagagtaaaacaggc
acagctggtacttcatccacccagcctgtttctactccacctaccaccacaccaacttca
atttcgactcccgcacctgatgctcaagcattggactcaaagagtgcatctgcttctgac
tcagcaacagccaatgcacagagtgatacttatggtcaagctgcttccaatttagttgct
ggtagtaatttggagcagactcttcagcaaataatggatatgggaggtggaacctgggat
aaagaaacagttactcgtgcacttcgagctgcctataataacccggagcgggcagtggat
tacttgtactcgggcattccagaaacagcggaagttgctgtcccagtggctaggtttcct
gcagatcaggctactgaaacaggtgcagctccagctgcccctgcacctgcatttggagca
cctaattcatctccattgaatatgtttcctgagacaatttctggtggtggaggtggtgct
ggtggcggacttggctctcttgatttccttagaaacaatcaacaatttcaagcattgcgt
tcaatggttcaagcaaatccacaaatcttgcagcccatgcttcaggagcttgggaagcaa
aacccccagcttttgagaattattcaagagcatcatgcagagtttcttcagttaataaat
gaacctcttgatggttctgaaggggatatatttgatcagcctgaccaagatatgccccat
gcaatcaatgtgaccccagctgaacaagaagctattgaacggctcgaggcaatgggtttt
gatagagcccttgtcatagaagcattcttggcttgtgatcgcaatgagcaactggcagcc
aactatctattggaaaatgctggagattttgaagattga
DBGET
integrated database retrieval system
