Populus nigra (Lombardy poplar): 133700735
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Entry
133700735 CDS
T10372
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03250
Viral life cycle - HIV-1
pnz03272
Virion - Hepatitis viruses
pnz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133700735
03272 Virion - Hepatitis viruses
133700735
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133700735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133700735
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133700735
Membrane trafficking [BR:
pnz04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
133700735
Exosome [BR:
pnz04147
]
Exosomal proteins
Proteins found in most exosomes
133700735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
Motif
Other DBs
NCBI-GeneID:
133700735
NCBI-ProteinID:
XP_061980362
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Position
8:complement(19630393..19631956)
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AA seq
401 aa
AA seq
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MVPPPSSNHQAIQQFLSSVLSQSGTSALPYSEDTKWLIRQHLLSLTTTSPSLEPKTATFT
HNDGRTVNLLQADGTVPITFISVTYNIPVIIWLFESYPRHPPCVYVNPTRDMIIKRSHPF
VNPSGLVSIPYLQNWIYPSSNLVDLARELSSVFGRDPPLFSQRPKPNPNPNYHPNQSSLG
SVGNTGGGGGYPRPIVRPPQYPPYGSGGAAGKVEAEDAAEVYKRNVIDKLVENVHGDMLQ
LSKTRQAEMESWFSAQSVLRGREEEFNKGLKEMRDKMEGLELHLQVVLMNTDVLEAWVKE
NKGKLKGASEDIDVDNAFECVDVLSKQMLECTAVDMAIEDAVYSLEKAVQEGAMPFDQYL
RNVRLLSREQFFNRATAAKVRSAQMQAQVAGMAARAPRYAT
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggttcctccaccgtcgtcaaaccaccaagcaatccaacaattcctctcgtccgtcctc
tctcaaagcggcacttccgcccttccttactccgaagacaccaaatggcttatccgccaa
cacctcctttcactcaccactacttccccttctctcgaacccaaaaccgctaccttcact
cacaacgatggtcgcaccgtcaatcttctccaggctgacggcaccgttccgatcactttc
atatctgtcacttataacatcccggttatcatctggcttttcgaatcttaccctcgccac
cctccttgtgtttacgtgaaccccacacgcgatatgatcatcaaaagatctcatcctttt
gtcaatccctcggggctcgtttcgatcccttatttgcagaattggatctaccctagttct
aatttggttgatttggctcgcgagctgagctcggtttttgggagggatcctcctctgttt
tcccaacgccccaaacctaaccctaatcccaattatcatccaaatcaatcgagtcttggg
tcagtgggtaacacgggaggtggtggtgggtatccgagaccgattgtcagaccaccacag
tatccgccgtatggtagtggtggtgcggcggggaaggtagaggcggaggatgcagcggag
gtttataaaagaaatgtgattgataagcttgtggagaatgttcacggggatatgttgcag
ttgagtaaaacgaggcaggcggagatggaaagctggtttagcgcacaatctgtgttgagg
gggagagaggaggagtttaataaagggttgaaagaaatgagagataagatggaagggttg
gagttgcatttgcaagttgttttgatgaatacggatgtcttggaagcatgggttaaggaa
aataaggggaagttgaaaggggcctcggaggatattgacgtggataatgcttttgagtgt
gtggatgttttgtcgaagcagatgttggagtgcacagcggtggacatggcaattgaggat
gcggtttattctttggagaaagcagtgcaagaaggggcaatgccatttgatcaatatttg
aggaatgtgaggttgttgtctagagagcagttttttaacagagcaactgcagcgaaagtt
aggtctgcacaaatgcaggctcaggttgctggtatggctgccagggcaccacgttatgct
acctga
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